RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 ZBBXA8MT70 800 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 UPK3BL1B0FP48 263 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 UPK3BL2E5RIL1 263 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 PCDH7O60245 1069 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 MPZL2O60487 215 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 ATG13O75143 517 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 ETHE1O95571 254 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 INHAP05111 366 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 HLA-EP13747 358 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 GABRB1P18505 474 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 IMPA1P29218 277 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 SLC19A1P41440 591 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 CRATP43155 626 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 RECQLP46063 649 aaPredicted RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 HMGA2P52926 109 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 MVDP53602 400 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.58□□□□□ -0.4
USB1-207ENST00000563149 ZNF763Q0D2J5 394 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 IRF3Q14653 427 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 CRB2Q5IJ48 1285 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 CATSPEREQ5SY80 951 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.58□□□□□ -0.4
USB1-207ENST00000563149 HENMT1Q5T8I9 393 aaKnown RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 PNCKQ6P2M8 343 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 TRIM40Q6P9F5 258 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.58□□□□□ -0.4
USB1-207ENST00000563149 TMC8Q8IU68 726 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 LYSMD2Q8IV50 215 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 CMTM8Q8IZV2 173 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 OXR1Q8N573 874 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 SLC5A8Q8N695 610 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 HUS1BQ8NHY5 278 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 PSMA8Q8TAA3 256 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 BTN2A2Q8WVV5 523 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 MTERF3Q96E29 417 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 WDR34Q96EX3 536 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 MED8Q96G25 268 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 ABHD8Q96I13 439 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 SCLYQ96I15 445 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 CCM2Q9BSQ5 444 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 EHD1Q9H4M9 534 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 GPBP1L1Q9HC44 474 aaPredicted RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 SCHIP1Q9P0W5 487 aaPredicted RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 PNMA8BQ9ULN7 279 aaPredicted RBP12.58□□□□□ -0.4
USB1-207ENST00000563149 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.58□□□□□ -0.4
USB1-207ENST00000563149 TET1Q8NFU7 2136 aa12.58□□□□□ -0.4
USB1-207ENST00000563149 DENND4CQ5VZ89 1909 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PLXNA2O75051 1894 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 GNG14A0A1W2PPG7 69 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 TSPAN11A1L157 253 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 ARRDC5A6NEK1 342 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 GPR37L1O60883 481 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 MTX2O75431 263 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 GADD45AP24522 165 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 S100A5P33763 92 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PRLHRP49683 370 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 LIMK1P53667 647 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 RPS13P62277 151 aaKnown RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 SPIBQ01892 262 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 DNASE1L3Q13609 305 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PDE7AQ13946 482 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 SCARB2Q14108 478 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 ZNF630Q2M218 657 aaPredicted RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 ZNF284Q2VY69 593 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 SLCO4C1Q6ZQN7 724 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 ZNF367Q7RTV3 350 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 HSD11B1LQ7Z5J1 315 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 LGI4Q8N135 537 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 CHST14Q8NCH0 376 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.57□□□□□ -0.47e-6■■■■□ 22
USB1-207ENST00000563149 GEMIN6Q8WXD5 167 aaKnown RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 PROX1Q92786 737 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 MAL2Q969L2 176 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PKP4Q99569 1192 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 MAPKAP1Q9BPZ7 522 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 HEPHQ9BQS7 1158 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 ZBTB20Q9HC78 741 aaPredicted RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 C1GALT1Q9NS00 363 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 ZNF226Q9NYT6 803 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 SPG21Q9NZD8 308 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 CNOT2Q9NZN8 540 aaKnown RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 ZNF229Q9UJW7 825 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PCDHGA4Q9Y5G9 962 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PEX16Q9Y5Y5 336 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 GPC6Q9Y625 555 aaPredicted RBP12.57□□□□□ -0.4
USB1-207ENST00000563149 DNAH12Q6ZR08 3092 aa12.57□□□□□ -0.4
USB1-207ENST00000563149 PNMA8CA0A1B0GUJ8 204 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 TRIM43BA6NCK2 446 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 KRT87PA6NCN2 255 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 EFCAB10A6NFE3 127 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 NPC1O15118 1278 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 AOC2O75106 756 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 COQ9O75208 318 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 GNRH1P01148 92 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 PABPC1P11940 636 aaKnown RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 ZNF8P17098 575 aaPredicted RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 C21orf33P30042 268 aaPredicted RBP12.56□□□□□ -0.4
USB1-207ENST00000563149 ALDH9A1P49189 494 aa12.56□□□□□ -0.4
USB1-207ENST00000563149 SF1Q15637 639 aaKnown RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms