RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 K7EPI3 171 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ZGLP1P0C6A0 271 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 GFAPP14136 432 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 MMP11P24347 488 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 AGTR2P50052 363 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 RRADP55042 308 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 FOXL2P58012 376 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 SKP1P63208 163 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ATP1A4Q13733 1029 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 SLBPQ14493 270 aaKnown RBP eCLIP15.69■□□□□ 0.1
CDT1-202ENST00000562747 HERC3Q15034 1050 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 SETDB1Q15047 1291 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 METTL2BQ6P1Q9 378 aaKnown RBP15.69■□□□□ 0.1
CDT1-202ENST00000562747 TMIGD1Q6UXZ0 262 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 OR9A4Q8NGU2 314 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ZCCHC10Q8TBK6 192 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 SSC4DQ8WTU2 575 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 UBLCP1Q8WVY7 318 aaPredicted RBP15.69■□□□□ 0.1
CDT1-202ENST00000562747 MOCOSQ96EN8 888 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 PTCD3Q96EY7 689 aaKnown RBP15.69■□□□□ 0.1
CDT1-202ENST00000562747 FER1L6-AS2Q96M78 137 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 EFCAB11Q9BUY7 163 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 TGIF2Q9GZN2 237 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ING2Q9H160 280 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 SOX17Q9H6I2 414 aaPredicted RBP15.69■□□□□ 0.1
CDT1-202ENST00000562747 PPCSQ9HAB8 311 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ACSS2Q9NR19 701 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 LUZP4Q9P127 313 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 TRPC4Q9UBN4 977 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 TMCO1Q9UM00 188 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 ASB1Q9Y576 335 aa15.69■□□□□ 0.1
CDT1-202ENST00000562747 PCDHGA9Q9Y5G4 932 aaKnown RBP15.69■□□□□ 0.1
CDT1-202ENST00000562747 A1L4Q6 167 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 PEX12O00623 359 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 SERPIND1P05546 499 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 SERPINA6P08185 405 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 IL1RNP18510 177 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 EPORP19235 508 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 CASP2P42575 452 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 CCL11P51671 97 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 VSNL1P62760 191 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 SNRPNP63162 240 aaKnown RBP15.68■□□□□ 0.1
CDT1-202ENST00000562747 KLC1Q07866 573 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 PCDH1Q08174 1060 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 LAPTM5Q13571 262 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 E2F2Q14209 437 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 NAA30Q147X3 362 aaPredicted RBP15.68■□□□□ 0.1
CDT1-202ENST00000562747 TBCCQ15814 346 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 PFKFB4Q16877 469 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 VWA2Q5GFL6 755 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 XKR6Q5GH73 641 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 PAGE2BQ5JRK9 111 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 ABHD13Q7L211 337 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 PPP1R32Q7Z5V6 425 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 LCA5Q86VQ0 697 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 AFAP1L2Q8N4X5 818 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 Q8NA96 180 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 VPS50Q96JG6 964 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 CRB3Q9BUF7 120 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 YIPF2Q9BWQ6 316 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 SLC6A16Q9GZN6 736 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 ZNF358Q9NW07 568 aa15.68■□□□□ 0.1
CDT1-202ENST00000562747 TNPO3Q9Y5L0 923 aaKnown RBP15.68■□□□□ 0.1
CDT1-202ENST00000562747 PRAMEF4O60810 478 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 KLHL18O94889 574 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 EPB42P16452 691 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 ALOX12P18054 663 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 IRF8Q02556 426 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 CHIT1Q13231 466 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 MRPL49Q13405 166 aaKnown RBP15.67■□□□□ 0.1
CDT1-202ENST00000562747 DOC2AQ14183 400 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 PCBP2Q15366 365 aaKnown RBP eCLIP15.67■□□□□ 0.1
CDT1-202ENST00000562747 PRAMEF9Q5VWM5 478 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 WDR93Q6P2C0 686 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 PRSS41Q7RTY9 318 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 TMEM151BQ8IW70 566 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.67■□□□□ 0.12e-6■■■■■ 163.7
CDT1-202ENST00000562747 ACMSDQ8TDX5 336 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 CREB3L4Q8TEY5 395 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 SCYL1Q96KG9 808 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 MRPL57Q9BQC6 102 aaKnown RBP15.67■□□□□ 0.1
CDT1-202ENST00000562747 P4HTMQ9NXG6 502 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 CPSF2Q9P2I0 782 aaKnown RBP15.67■□□□□ 0.1
CDT1-202ENST00000562747 XPR1Q9UBH6 696 aa15.67■□□□□ 0.1
CDT1-202ENST00000562747 HIVEP3Q5T1R4 2406 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 RP1L1Q8IWN7 2480 aaPredicted RBP15.66■□□□□ 0.1
CDT1-202ENST00000562747 ITPR2Q14571 2701 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 ANKDD1BA6NHY2 528 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 SGK494L7N484 410 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 AGPSO00116 658 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 PCDH17O14917 1159 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 GALR3O60755 368 aaPredicted RBP15.66■□□□□ 0.1
CDT1-202ENST00000562747 SMIM24O75264 130 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 CLEC3AO75596 197 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 CEACAM4O75871 244 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 WFS1O76024 890 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 CYC1P08574 325 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 HPDP32754 393 aaPredicted RBP15.66■□□□□ 0.1
CDT1-202ENST00000562747 PIK3CGP48736 1102 aa15.66■□□□□ 0.1
CDT1-202ENST00000562747 STXBP1P61764 594 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms