RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 TNFSF8P32971 234 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ETV6P41212 452 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 PXNP49023 591 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 SMAD3P84022 425 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 PLD1Q13393 1074 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 MBTPS1Q14703 1052 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 ZFP69Q49AA0 526 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 NXNL2Q5VZ03 156 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CRTC1Q6UUV9 634 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 TMC5Q6UXY8 1006 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 RFLNAQ6ZTI6 216 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 BBS7Q8IWZ6 715 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 UBQLNLQ8IYU4 475 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CBARPQ8N350 705 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 C1orf52Q8N6N3 182 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 DCAF4L2Q8NA75 395 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 FCRL1Q96LA6 429 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 DMRTB1Q96MA1 342 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 C2orf49Q9BVC5 232 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 KLF16Q9BXK1 252 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 MBD1Q9UIS9 605 aaPredicted RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 OR51B4Q9Y5P0 310 aa13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 CFAP20Q9Y6A4 193 aaKnown RBP13.44□□□□□ -0.26
VPS9D1-202ENST00000561976 C1orf226A1L170 272 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 AP3D1O14617 1153 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SLITRK5O94991 958 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 CD22P20273 847 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PTX3P26022 381 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 OR1D2P34982 312 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TUFMP49411 452 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PRIM2P49643 509 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PFN3P60673 137 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 FKBP1BP68106 108 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 IRF3Q14653 427 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 STARD3Q14849 445 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ANXA8L1Q5VT79 327 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 C17orf99Q6UX52 265 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PTCHD4Q6ZW05 846 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 HJURPQ8NCD3 748 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TMCO6Q96DC7 493 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 NPAP1Q9NZP6 1156 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 BTNL2Q9UIR0 455 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TMEM98Q9Y2Y6 226 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 CENPXA8MT69 81 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 H3BQ06 376 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ARHGAP33O14559 1287 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SEPT4O43236 478 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SERPINA4P29622 427 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 DGKEP52429 567 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 GANABQ14697 944 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PTGES3Q15185 160 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 COX20Q5RI15 118 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 LIPJQ5W064 366 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 RGMBQ6NW40 437 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF517Q6ZMY9 492 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TMEM173Q86WV6 379 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 FLCNQ8NFG4 579 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 OR4C15Q8NGM1 316 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 MED8Q96G25 268 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 MAGEB10Q96LZ2 347 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 NEDD4LQ96PU5 975 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 FAM129BQ96TA1 746 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SGK2Q9HBY8 427 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SMURF1Q9HCE7 757 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 CLN6Q9NWW5 311 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TMEM161AQ9NX61 479 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TAS2R9Q9NYW1 312 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TBC1D24Q9ULP9 559 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 E7EQ34 232 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 PCDH17O14917 1159 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 MTX2O75431 263 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ITGA2P17301 1181 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 CD72P21854 359 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 AZGP1P25311 298 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ASMTP46597 345 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 LIMK1P53667 647 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 DOC2AQ14183 400 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 VASH1Q7L8A9 365 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 NFKBIDQ8NI38 313 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 OVCA2Q8WZ82 227 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 TRNT1Q96Q11 434 aaKnown RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 DEPDC7Q96QD5 511 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ASPNQ9BXN1 380 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 KLHL42Q9P2K6 505 aa13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF282Q9UDV7 671 aaPredicted RBP13.43□□□□□ -0.26
VPS9D1-202ENST00000561976 SERTM1A2A2V5 107 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 EIF3FO00303 357 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 SOCS5O75159 536 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 GPX5O75715 221 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 CCNB2O95067 398 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 IGSF6O95976 241 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 TEKQ02763 1124 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 SCARB2Q14108 478 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF648Q5T619 568 aaPredicted RBP13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ADNP2Q6IQ32 1131 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 SERPINA13PQ6UXR4 307 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 ZNF852Q6ZMS4 543 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 RAB43Q86YS6 212 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
VPS9D1-202ENST00000561976 OR4K1Q8NGD4 311 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms