RNA–Protein interactions for RNA: ENST00000561864.1

AC055717.2-201, humanhuman

TSL 4 BASIC

Gene AC055717.2, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.2-201ENST00000561864 ZNF551Q7Z340 670 aaPredicted RBP12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 PTOV1Q86YD1 416 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 SYNPOQ8N3V7 929 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 C2orf73Q8N5S3 287 aaPredicted RBP12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 DEFB123Q8N688 67 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 LINC01555Q8NAE3 123 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 TMBIM1Q969X1 311 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 TBC1D20Q96BZ9 403 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 WDR92Q96MX6 357 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 ACAT2Q9BWD1 397 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 EPB41L1Q9H4G0 881 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 KIR3DX1Q9H7L2 352 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 FGF22Q9HCT0 170 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 FZD3Q9NPG1 666 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 CUEDC1Q9NWM3 386 aaPredicted RBP12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 USE1Q9NZ43 259 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 MOSPD1Q9UJG1 213 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 PCDHGB4Q9UN71 923 aa12.11□□□□□ -0.47
AC055717.2-201ENST00000561864 PCM1Q15154 2024 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 SMIM31A0A1B0GVY4 71 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TRBC2A0A5B9 178 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 SAP18O00422 153 aaKnown RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 PLPP1O14494 284 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TOR1BO14657 336 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 SLC31A1O15431 190 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 CAPN5O15484 640 aaPredicted RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 NDUFS4O43181 175 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 KLHL18O94889 574 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 H6PDO95479 791 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 APBB3O95704 486 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 CST1P01037 141 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 IL3P08700 152 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 HNRNPA2B1P22626 353 aaKnown RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 PSMB5P28074 263 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 NDUFS1P28331 727 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 KDELR2P33947 212 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 ARSFP54793 590 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TRA2BP62995 288 aaKnown RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 CSNK1G2P78368 415 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 FADDQ13158 208 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 GAB1Q13480 694 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 GK3PQ14409 553 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 CLCA4Q14CN2 919 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TEAD4Q15561 434 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 RPE65Q16518 533 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 KCTD21Q4G0X4 260 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 LIN52Q52LA3 116 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TMEM35AQ53FP2 167 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 CCNYL2Q5T2Q4 361 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 KIAA1324Q6UXG2 1013 aaKnown RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 NUDT13Q86X67 352 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 ZDHHC13Q8IUH4 622 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 DHRSXQ8N5I4 330 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 TBC1D19Q8N5T2 526 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 ANKRD53Q8N9V6 530 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 OR52E1Q8NGJ3 308 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 SPASTQ9UBP0 616 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 MMP17Q9ULZ9 603 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 ICKQ9UPZ9 632 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 MYRFQ9Y2G1 1151 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 COLEC10Q9Y6Z7 277 aa12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 LAMA2P24043 3122 aaKnown RBP12.1□□□□□ -0.47
AC055717.2-201ENST00000561864 C2CD4DB7Z1M9 353 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 G3V2T6 193 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 H3BNH8 94 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 H7BY64 318 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 GNGT2O14610 69 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 TNFRSF10CO14798 259 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 TBX6O95947 436 aaPredicted RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 CLPTM1O96005 669 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 SEMG1P04279 462 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ALPLP05186 524 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PABPC4LP0CB38 370 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 NDUFV2P19404 249 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 DDCP20711 480 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 HTR1BP28222 390 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 AKT2P31751 481 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 SHMT2P34897 504 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 BSGP35613 385 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 RPL5P46777 297 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ARFIP1P53367 373 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 MAPK12P53778 367 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 YPEL5P62699 121 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ADARB1P78563 741 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 VAC14Q08AM6 782 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 RBBP4Q09028 425 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ELOAQ14241 798 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 RGNQ15493 299 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 TMEM214Q6NUQ4 689 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 ABRAXAS1Q6UWZ7 409 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 CBLL1Q75N03 491 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 EIF3MQ7L2H7 374 aaKnown RBP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 HIPK1Q86Z02 1210 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 SLC30A8Q8IWU4 369 aa12.09□□□□□ -0.47
AC055717.2-201ENST00000561864 SLC44A3Q8N4M1 653 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms