RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 ROPN1LQ96C74 230 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 RCN3Q96D15 328 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 C11orf24Q96F05 449 aaPredicted RBP9.84□□□□□ -0.83
USP3-219ENST00000561326 TGM7Q96PF1 710 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TSSK3Q96PN8 268 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 KCNC2Q96PR1 638 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TRAPPC9Q96Q05 1148 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 CCDC3Q9BQI4 270 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 TBCDQ9BTW9 1192 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 ROGDIQ9GZN7 287 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 ZMYND15Q9H091 742 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 KCNH6Q9H252 994 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 PILRAQ9UKJ1 303 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 PCDHGB2Q9Y5G2 931 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 R4GN57 208 aa9.84□□□□□ -0.83
USP3-219ENST00000561326 A0A0J9YVX5 310 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 CPED1A4D0V7 1026 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 SLC9B1P1A6NJY1 282 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 TRIM38O00635 465 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 PLPP1O14494 284 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 ANKRD28O15084 1053 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 GSC2O15499 205 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 ZSCAN9O15535 394 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 B4GAT1O43505 415 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 ENGP17813 658 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 S100A3P33764 101 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 PGM1P36871 562 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 HPCAL1P37235 193 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 SSR2P43308 183 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 ARL4DP49703 201 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MAPK12P53778 367 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 CORO7P57737 925 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 C21orf58P58505 322 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 TRA2BP62995 288 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 RAE1P78406 368 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 LRRC74AQ0VAA2 488 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MAPKAPK3Q16644 382 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 PGS1Q32NB8 556 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 AMZ1Q400G9 498 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 TMTC4Q5T4D3 741 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 WDR74Q6RFH5 385 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 HACD2Q6Y1H2 254 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 FAM92BQ6ZTR7 304 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 IKBIPQ70UQ0 350 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 GPR180Q86V85 440 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 NUDT13Q86X67 352 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 DSELQ8IZU8 1212 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MINDY1Q8N5J2 469 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 NATD1Q8N6N6 113 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 Q8N9G6 341 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 C19orf47Q8N9M1 422 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 CDC26Q8NHZ8 85 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 C16orf78Q8WTQ4 265 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 N4BP2L2Q92802 583 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 TM4SF19Q96DZ7 209 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MTERF3Q96E29 417 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 TEX37Q96LM6 180 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 OR2A5Q96R48 311 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 OR52E6Q96RD3 313 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MAP3K3Q99759 626 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 DPYSL5Q9BPU6 564 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 HOPXQ9BPY8 73 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 EBPLQ9BY08 206 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 CHRNA10Q9GZZ6 450 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 KLHL25Q9H0H3 589 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 IRF2BPLQ9H1B7 796 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 CLMPQ9H6B4 373 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 RMND5AQ9H871 391 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 DDX31Q9H8H2 851 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 COPS7BQ9H9Q2 264 aaPredicted RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 PDE7BQ9NP56 450 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 MYNNQ9NPC7 610 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 FSCN3Q9NQT6 498 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 ATAD3AQ9NVI7 634 aa9.83□□□□□ -0.84
USP3-219ENST00000561326 DNAAF2Q9NVR5 837 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 RRP15Q9Y3B9 282 aaKnown RBP9.83□□□□□ -0.84
USP3-219ENST00000561326 SEC16AO15027 2179 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 EME2A4GXA9 379 aaPredicted RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 ANKRD65E5RJM6 399 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 H0YGG7 62 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ERI3O43414 337 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 AKAP10O43572 662 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CTSVO60911 334 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 EEDO75530 441 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 RASSF9O75901 435 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 ZBTB11O95625 1053 aaPredicted RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 EIF2S1P05198 315 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 PGRP06401 933 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 RETP07949 1114 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 COX7A2P14406 83 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 PVRP15151 417 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 NQO1P15559 274 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 ST6GAL1P15907 406 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 TACR1P25103 407 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CD1CP29017 333 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 IL12AP29459 219 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 HNRNPH1P31943 449 aaKnown RBP9.82□□□□□ -0.84
USP3-219ENST00000561326 BSGP35613 385 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 CPOXP36551 454 aa9.82□□□□□ -0.84
USP3-219ENST00000561326 GRK6P43250 576 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms