RNA–Protein interactions for RNA: ENST00000560634.1

CSPG4P11-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 11, humanhuman

BASIC

Gene CSPG4P11, Length 4,910 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P11-201ENST00000560634 S100A10P60903 97 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PPP1R8Q12972 351 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 IRF5Q13568 498 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RABL3Q5HYI8 236 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RAB11FIP2Q7L804 512 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PSD4Q8NDX1 1056 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 DENND6BQ8NEG7 585 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 THEM6Q8WUY1 208 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PNO1Q9NRX1 252 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 EMC3Q9P0I2 261 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 BHMG1C9JSJ3 638 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 AOC2O75106 756 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 USP2O75604 605 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 VNN2O95498 520 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 IL3P08700 152 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 TCEA1P23193 301 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 CTSOP43234 321 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ATG9BQ674R7 924 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 OTOP2Q7RTS6 562 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 CILP2Q8IUL8 1156 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR8J3Q8NGG0 315 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR9I1Q8NGQ6 314 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SIGLEC10Q96LC7 697 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 GAS2L1Q99501 681 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SIRPGQ9P1W8 387 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 WDR45Q9Y484 360 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 A0A0J9YVX5 310 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 C13orf42A0A1B0GVH6 325 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SH3D21A4FU49 640 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 UPK3BL1B0FP48 263 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 UPK3BL2E5RIL1 263 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ALPIP09923 528 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 GP1BBP13224 206 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 HOXD8P13378 290 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RPL6Q02878 288 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC25A11Q02978 314 aaKnown RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 MYLK3Q32MK0 819 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF367Q7RTV3 350 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZSWIM9Q86XI8 627 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 SLC15A3Q8IY34 581 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 CENPSQ8N2Z9 138 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 TCEANCQ8N8B7 351 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZSCAN4Q8NAM6 433 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR5J2Q8NH18 312 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 GNPDA2Q8TDQ7 276 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 HSPBAP1Q96EW2 488 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 BCO2Q9BYV7 579 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RABL2AQ9UBK7 228 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 RABL2BQ9UNT1 228 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 YIPF1Q9Y548 306 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PCDHB11Q9Y5F2 797 aa12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 MAGED1Q9Y5V3 778 aaPredicted RBP12.79□□□□□ -0.36
CSPG4P11-201ENST00000560634 PCDHGA12O60330 932 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 GNSP15586 552 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CTBP2P56545 445 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 PCLAFQ15004 111 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CDK10Q15131 360 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 SPIN3Q5JUX0 258 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 HSDL2Q6YN16 418 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 C12orf40Q86WS4 652 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 DCUN1D3Q8IWE4 304 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 PEX13Q92968 403 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CCDC120Q96HB5 630 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 TTYH2Q9BSA4 534 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CD244Q9BZW8 370 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 SCML2Q9UQR0 700 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ADAMTS3O15072 1205 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 AXIN1O15169 862 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 TBX18O95935 607 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 MATN1P21941 496 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 GSCP56915 257 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 HERV-K104P61576 105 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF763Q0D2J5 394 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 AIMP2Q13155 320 aaKnown RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 TGFBIQ15582 683 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 SFT2D3Q587I9 215 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CDKL4Q5MAI5 379 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 GLT8D1Q68CQ7 371 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CPNE8Q86YQ8 564 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR4K17Q8NGC6 315 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 TMEM74Q96NL1 305 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR51I1Q9H343 314 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ACTL8Q9H568 366 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 AJAP1Q9UKB5 411 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 HS3ST4Q9Y661 456 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 GABBR2O75899 941 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 CH25HO95992 272 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 HPRP00739 348 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 FOSL2P15408 326 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 FUT4P22083 530 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 OC90Q02509 493 aaPredicted RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ALG10BQ5I7T1 473 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 PM20D2Q8IYS1 436 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZDHHC14Q8IZN3 488 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 GOLM1Q8NBJ4 401 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 LSM14AQ8ND56 463 aaKnown RBP12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 OR6N1Q8NGY5 312 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
CSPG4P11-201ENST00000560634 KCNH6Q9H252 994 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms