RNA–Protein interactions for RNA: ENST00000560565.1

CCDC33-209, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best)

Gene CCDC33, Length 1,275 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-209ENST00000560565 GLT6D1Q7Z4J2 308 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 METTL3Q86U44 580 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PIM3Q86V86 326 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 LIX1LQ8IVB5 337 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 GALNT12Q8IXK2 581 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CMTM8Q8IZV2 173 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CACTIN-AS1Q8N1I8 211 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 METTL4Q8N3J2 472 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CPA6Q8N4T0 437 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TMEM105Q8N8V8 129 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 GDPD1Q8N9F7 314 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 LSM14AQ8ND56 463 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 DNASE1L2Q92874 299 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 RHBDF1Q96CC6 855 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 LINGO1Q96FE5 620 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MYO19Q96H55 970 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CDKN2AIPNLQ96HQ2 116 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TBATAQ96M53 351 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 MAPKAP1Q9BPZ7 522 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 CPPED1Q9BRF8 314 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 NTMT1Q9BV86 223 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SLC46A2Q9BY10 475 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 NIPAL2Q9H841 368 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TBC1D17Q9HA65 648 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 RDH14Q9HBH5 336 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 GKN1Q9NS71 199 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 IMPAD1Q9NX62 359 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TBC1D14Q9P2M4 693 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PSORS1C1Q9UIG5 152 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 IKZF3Q9UKT9 509 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 ITM2BQ9Y287 266 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SIT1Q9Y3P8 196 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 SAMHD1Q9Y3Z3 626 aaKnown RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PKP3Q9Y446 797 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 POLR3HQ9Y535 204 aaPredicted RBP8.26□□□□□ -1.09
CCDC33-209ENST00000560565 PCDHB14Q9Y5E9 798 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 NOX1Q9Y5S8 564 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 FAM186AA6NE01 2351 aa8.26□□□□□ -1.09
CCDC33-209ENST00000560565 TICRRQ7Z2Z1 1910 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SLC35F4A4IF30 521 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 NPEPPSL1A6NEC2 478 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ARRDC5A6NEK1 342 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 MYO1GB0I1T2 1018 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RFXANKO14593 260 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ANKRD28O15084 1053 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PI15O43692 258 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GREM1O60565 184 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PRAMEF11O60813 436 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 OR4F21O95013 312 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 MT-ND1P03886 318 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RHOCP08134 193 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 EPB42P16452 691 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 AGXTP21549 392 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 TCEA1P23193 301 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 HLA-DMAP28067 261 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 FMO4P31512 558 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SLC6A4P31645 630 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GGT2P36268 569 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 TGFBR2P37173 567 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RPL3P39023 403 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 KCNC1P48547 511 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RORCP51449 518 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF140P52738 457 aaPredicted RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 NCS1P62166 190 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RPS14P62263 151 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RPL38P63173 70 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 IFITM3Q01628 133 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CACNG1Q06432 222 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GTF2H3Q13889 308 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 KIAA0040Q15053 153 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 DUSP7Q16829 419 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 PTPRNQ16849 979 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 FAM174BQ3ZCQ3 159 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GGTA1PQ4G0N0 100 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF789Q5FWF6 425 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 COLEC12Q5KU26 742 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF362Q5T0B9 420 aaPredicted RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 C10orf62Q5T681 223 aaPredicted RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 C6orf183Q5T699 404 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ANXA8L1Q5VT79 327 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RNLSQ5VYX0 342 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 LRRC66Q68CR7 880 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 BICRALQ6AI39 1079 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZCCHC8Q6NZY4 707 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ENPP6Q6UWR7 440 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GCNT7Q6ZNI0 430 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 Q6ZSR9 355 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 GOLGA7Q7Z5G4 137 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CCDC190Q86UF4 302 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CDH24Q86UP0 819 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 NLRP8Q86W28 1048 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 SYTL1Q8IYJ3 562 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CELF5Q8N6W0 485 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 IL17RDQ8NFM7 739 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 OR6F1Q8NGZ6 308 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 CNIH3Q8TBE1 160 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 ZNF675Q8TD23 568 aa8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RPL3LQ92901 407 aaKnown RBP8.25□□□□□ -1.09
CCDC33-209ENST00000560565 RSPRY1Q96DX4 576 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms