RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 TTYH1Q9H313 450 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FOXP1Q9H334 677 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 NOL11Q9H8H0 719 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CNOT10Q9H9A5 744 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SGK2Q9HBY8 427 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 APMAPQ9HDC9 416 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DDX19AQ9NUU7 478 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 POT1Q9NUX5 634 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 HIF1ANQ9NWT6 349 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 GIN1Q9NXP7 522 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CLEC5AQ9NY25 188 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TXNDC16Q9P2K2 825 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ABCD2Q9UBJ2 740 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ARPP21Q9UBL0 812 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRSS50Q9UI38 385 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 AMFRQ9UKV5 643 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ST3GAL5Q9UNP4 418 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 DIMT1Q9UNQ2 313 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 HPSEQ9Y251 543 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 UBE2J1Q9Y385 318 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CDY2AQ9Y6F7 541 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ADGRL3Q9HAR2 1447 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PLEKHH1Q9ULM0 1364 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NRCAMQ92823 1304 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TRBV23OR9-2A0A075B6M9 112 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 A0A1W2PQ67 120 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM213A2RRL7 107 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NEMP2A6NFY4 417 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ANKRD61A6NGH8 418 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A20PA6NIJ5 464 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR2AT4A6NND4 320 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM171A2A8MVW0 826 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TMEM233B4DJY2 109 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 C22orf46C9J442 243 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 H3BQ06 376 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PYCARD-AS1I3L0S3 204 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 FBP2O00757 339 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ANKRD28O15084 1053 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 AP5Z1O43299 807 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SIGLEC6O43699 453 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRICKLE3O43900 615 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CCNT2O60583 730 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CNOT3O75175 753 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 USP12O75317 370 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NDUFS6O75380 124 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MOSPD3O75425 235 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ERN1O75460 977 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 RAD51DO75771 328 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 STBD1O95210 358 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRAMEF1O95521 474 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 LDOC1O95751 146 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CHRNGP07510 517 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 RHOP08100 348 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TRIM49P0CI25 452 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TRIM49CP0CI26 452 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GIMD1P0DJR0 217 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 COX7A2P14406 83 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF18P17022 549 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF26P17031 533 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GABRB1P18505 474 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PRKCHP24723 683 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PON1P27169 355 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PPP2R1BP30154 601 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CASP14P31944 242 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CYP2C18P33260 490 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 RYKP34925 604 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TALDO1P37837 337 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 IGHMBP2P38935 993 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAGEA3P43357 314 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CAPZBP47756 277 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OMPP47874 163 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SLC6A12P48065 614 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTDSS1P48651 473 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MAPK12P53778 367 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PER3P56645 1201 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 OR2B6P58173 313 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 UBE2G2P60604 165 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CXCR4P61073 352 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ATP6V0D1P61421 351 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 RPS7P62081 194 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 GNAI1P63096 354 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SIM1P81133 766 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 TARDBPQ13148 414 aaKnown RBP eCLIP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CTBP1Q13363 440 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 SNTA1Q13424 505 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MED21Q13503 144 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 CYTH1Q15438 398 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 C18orf21Q32NC0 220 aaPredicted RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 PTCHD3Q3KNS1 767 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ACCSLQ4AC99 568 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF766Q5HY98 468 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 MANEAQ5SRI9 462 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NT5DC1Q5TFE4 455 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 NCR3LG1Q68D85 454 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 DGAT2L7PQ6IED9 249 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZFP1Q6P2D0 407 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 ULK3Q6PHR2 472 aa4.32□□□□□ -1.72
HMGB3P26-201ENST00000560051 BHLHB9Q6PI77 547 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms