RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 TEAD4Q15561 434 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CYP2A13Q16696 494 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 TMTC4Q5T4D3 741 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 PEAR1Q5VY43 1037 aaPredicted RBP17.06■□□□□ 0.32
SNX1-208ENST00000559844 GALNT18Q6P9A2 607 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 UGT2A3Q6UWM9 527 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CAMKMTQ7Z624 323 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CALHM3Q86XJ0 350 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 RAB42Q8N4Z0 105 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 PHC3Q8NDX5 983 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CXorf40BQ96DE9 158 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 LOXL4Q96JB6 756 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 INPP5KQ9BT40 448 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 PCBD2Q9H0N5 130 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 IKZF5Q9H5V7 419 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 DMRT3Q9NQL9 472 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 GPR27Q9NS67 375 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 ADGRE2Q9UHX3 823 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 SH2B3Q9UQQ2 575 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 DMDP11532 3685 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 GPR179Q6PRD1 2367 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 SAC3D1A6NKF1 404 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 EVPLLA8MZ36 301 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 TLR4O00206 839 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CXCR6O00574 342 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 VILLO15195 856 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 HOXC4P09017 264 aaPredicted RBP17.06■□□□□ 0.32
SNX1-208ENST00000559844 ZCCHC18P0CG32 403 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 RAP2AP10114 183 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 PTPN6P29350 595 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 HOXD12P35452 270 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 C21orf59P57076 290 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CHRNB3Q05901 458 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 C6orf52Q5T4I8 152 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 ANXA8L1Q5VT79 327 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 ENPP7Q6UWV6 458 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 ANKRD46Q86W74 232 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 VPS37AQ8NEZ2 397 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 OR7A2PQ8NGA2 310 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 FIG4Q92562 907 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 WDR92Q96MX6 357 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 SEPHS2Q99611 448 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 SLC29A1Q99808 456 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 CHID1Q9BWS9 393 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 PELI2Q9HAT8 420 aa17.06■□□□□ 0.32
SNX1-208ENST00000559844 SPTY2D1-AS1A0A0U1RR47 76 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 PCDH7O60245 1069 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 EPN2O95208 641 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 CFIP05156 583 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 CKMT2P17540 419 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 LAIR1Q6GTX8 287 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 CAPRIN2Q6IMN6 1127 aaKnown RBP17.05■□□□□ 0.32
SNX1-208ENST00000559844 FKBP9P1Q75LS8 142 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 DCP2Q8IU60 420 aaKnown RBP17.05■□□□□ 0.32
SNX1-208ENST00000559844 CDC26Q8NHZ8 85 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 FAM162AQ96A26 154 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 REXO5Q96IC2 774 aaKnown RBP17.05■□□□□ 0.32
SNX1-208ENST00000559844 CNBD2Q96M20 576 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 RNF145Q96MT1 663 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 IL17FQ96PD4 163 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 PANX1Q96RD7 426 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 BDH2Q9BUT1 245 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 DUSP26Q9BV47 211 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 TM7SF3Q9NS93 570 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 SLC6A13Q9NSD5 602 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 MOSPD1Q9UJG1 213 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 HCN4Q9Y3Q4 1203 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 LAMA1P25391 3075 aa17.05■□□□□ 0.32
SNX1-208ENST00000559844 A0A1B0GVT2 93 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 GNG14A0A1W2PPG7 69 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 C7orf72A4D263 438 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 GSNP06396 782 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CEACAM5P06731 702 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 RETP07949 1114 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CXCR2P25025 360 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 RPL3P39023 403 aaKnown RBP17.04■□□□□ 0.32
SNX1-208ENST00000559844 CDKN2CP42773 168 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 GZMMP51124 257 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 WNT3P56703 355 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CPTPQ5TA50 214 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 OR52E8Q6IFG1 317 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 ADNP2Q6IQ32 1131 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 SPRED1Q7Z699 444 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 RABEPKQ7Z6M1 372 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CENPKQ9BS16 269 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 TBCDQ9BTW9 1192 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 ARRDC1-AS1Q9H2J1 176 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 FGF22Q9HCT0 170 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 BTNL2Q9UIR0 455 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 PLAGL1Q9UM63 463 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 SLC17A4Q9Y2C5 497 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 FAM149AA5PLN7 773 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 SOCS2O14508 198 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 SCN2BO60939 215 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 MPLP40238 635 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CLCNKAP51800 687 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 ZNF763Q0D2J5 394 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 FZD2Q14332 565 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 TMIGD1Q6UXZ0 262 aa17.04■□□□□ 0.32
SNX1-208ENST00000559844 CHST15Q7LFX5 561 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms