RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 GPR18Q14330 331 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ADPRMQ3LIE5 342 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 TMEM35AQ53FP2 167 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CCNYL2Q5T2Q4 361 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ANKRD26P1Q6NSI1 321 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 DNAJC14Q6Y2X3 702 aaPredicted RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 MAMSTRQ6ZN01 415 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 UBE3DQ7Z6J8 389 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CALHM3Q86XJ0 350 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 TRIM48Q8IWZ4 208 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 LILRA2Q8N149 483 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 NAGSQ8N159 534 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 TBC1D19Q8N5T2 526 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 OR10A6Q8NH74 314 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 RGMAQ96B86 450 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PANX1Q96RD7 426 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 CENPKQ9BS16 269 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 SORBS1Q9BX66 1292 aaKnown RBP12.13□□□□□ -0.47
USP3-213ENST00000559711 LHX9Q9NQ69 397 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ATAD3AQ9NVI7 634 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 ARMC1Q9NVT9 282 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 MAGEL2Q9UJ55 1249 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 RIMS3Q9UJD0 308 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 USP22Q9UPT9 525 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 INVSQ9Y283 1065 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 SIT1Q9Y3P8 196 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PCDHGA2Q9Y5H1 932 aa12.13□□□□□ -0.47
USP3-213ENST00000559711 PCM1Q15154 2024 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 TCRBV5S2A0A599 114 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 K7ESF4 209 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 TLR4O00206 839 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 RNASET2O00584 256 aaKnown RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 AXIN1O15169 862 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 NDUFS4O43181 175 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 TNFSF14O43557 240 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 PEX1O43933 1283 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 CSF2P04141 144 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 GSNP06396 782 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 ZCCHC18P0CG32 403 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 JUNDP17535 347 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 GSTM5P46439 218 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 ARFIP1P53367 373 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 RPL6Q02878 288 aaKnown RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 ZNF385BQ569K4 471 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 GLYATQ6IB77 296 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 SLC36A4Q6YBV0 504 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 PAQR7Q86WK9 346 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 DEFB119Q8N690 84 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 MFSD9Q8NBP5 474 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 ZNF548Q8NEK5 533 aaPredicted RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 TRPV3Q8NET8 790 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 TNIP2Q8NFZ5 429 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 OR2T12Q8NG77 320 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 MAFAQ8NHW3 353 aaPredicted RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 C1orf216Q8TAB5 229 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 SLC37A2Q8TED4 501 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 CANT1Q8WVQ1 401 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 PATE1Q8WXA2 126 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 AURKBQ96GD4 344 aaPredicted RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 OR2A14Q96R47 310 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 PKP2Q99959 881 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 IER2Q9BTL4 223 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 PIF1Q9H611 641 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 DDX31Q9H8H2 851 aaKnown RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 SH3BP4Q9P0V3 963 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 APOBEC3BQ9UH17 382 aaKnown RBP12.12□□□□□ -0.47
USP3-213ENST00000559711 PCDHGA4Q9Y5G9 962 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 KLK4Q9Y5K2 254 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 ENTPD2Q9Y5L3 495 aa12.12□□□□□ -0.47
USP3-213ENST00000559711 DHRS12A0PJE2 317 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 RTCAO00442 366 aaKnown RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 MAP3K13O43283 966 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 TBX19O60806 448 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 FKBP9O95302 570 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 GPIP06744 558 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 IL3P08700 152 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 UMPSP11172 480 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 NME1P15531 152 aaKnown RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 NCK1P16333 377 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 GGT1P19440 569 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 TRA2BP62995 288 aaKnown RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 MC1RQ01726 317 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 ABHD18Q0P651 414 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 HYAL2Q12891 473 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 C1orf61Q13536 156 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 PLCL1Q15111 1095 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 MUM1Q2TAK8 710 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 OGFRL1Q5TC84 451 aaPredicted RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 OR4C11Q6IEV9 310 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 NUDT13Q86X67 352 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 RBM12BQ8IXT5 1001 aaKnown RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 ADGRG5Q8IZF4 528 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 CLECL1Q8IZS7 167 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 DTWD1Q8N5C7 304 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 TMEM102Q8N9M5 508 aaPredicted RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 OR52E4Q8NGH9 312 aa12.11□□□□□ -0.47
USP3-213ENST00000559711 GOT1L1Q8NHS2 421 aaPredicted RBP12.11□□□□□ -0.47
USP3-213ENST00000559711 DNAJC9Q8WXX5 260 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms