RNA–Protein interactions for RNA: ENST00000558394.5

TSPAN3-204, Transcript of tetraspanin 3, humanhuman

TSL 4

Gene TSPAN3, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-204ENST00000558394 EMC4Q5J8M3 183 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 CAPN13Q6MZZ7 669 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 Q71RC1 249 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC26A11Q86WA9 606 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 FBXO15Q8NCQ5 510 aaPredicted RBP16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 OR5M9Q8NGP3 310 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 LPGAT1Q92604 370 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 TCF12Q99081 682 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 PCBD2Q9H0N5 130 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 RASSF1Q9NS23 344 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 PNPLA3Q9NST1 481 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 TREX1Q9NSU2 369 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 ERVK-11Q9UQG0 969 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 SLC22A7Q9Y694 548 aa16.65■□□□□ 0.26
TSPAN3-204ENST00000558394 FEZF1A0PJY2 475 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 VAPBO95292 243 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 PPIAP62937 165 aaKnown RBP16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 CRADDP78560 199 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 SLC25A35Q3KQZ1 300 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 FBXW10Q5XX13 1052 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 NIPAL1Q6NVV3 410 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 B3GNT6Q6ZMB0 384 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 CCDC170Q8IYT3 715 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 ARMC2Q8NEN0 867 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 OR5T3Q8NGG3 340 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 TM4SF19Q96DZ7 209 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 IL22Q9GZX6 179 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 BFARQ9NZS9 450 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 GALPQ9UBC7 116 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 FBXW2Q9UKT8 454 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 AMFRQ9UKV5 643 aa16.64■□□□□ 0.25
TSPAN3-204ENST00000558394 FAM47E-STBD1D6RA91 191 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 AP3B1O00203 1094 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 BCKDKO14874 412 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 IPO7O95373 1038 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 NMBRP28336 390 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 CLCN2P51788 898 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 ADARP55265 1226 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 DLX5P56178 289 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 KLF1Q13351 362 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 TYSND1Q2T9J0 566 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 SKOR2Q2VWA4 1001 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 RGS9BPQ6ZS82 235 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 PEX26Q7Z412 305 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 WDR53Q7Z5U6 358 aaPredicted RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 C17orf64Q86WR6 236 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 CCDC89Q8N998 374 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 MBD6Q96DN6 1003 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 LRRC46Q96FV0 321 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 C18orf12Q96KH6 178 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 CCDC138Q96M89 665 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 SMC6Q96SB8 1091 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 TTYH2Q9BSA4 534 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 ZNF148Q9UQR1 794 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 DRG1Q9Y295 367 aaKnown RBP16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 VPS9D1Q9Y2B5 631 aa16.63■□□□□ 0.25
TSPAN3-204ENST00000558394 TRBV11-1A0A0K0K1C0 115 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 OR14I1A6ND48 311 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 FAM166BA8MTA8 275 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 A8MUA0 341 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 GOLGA8KD6RF30 607 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 GOLGA8TH3BQL2 631 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 PSMD12O00232 456 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 CHST10O43529 356 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 ITGA10O75578 1167 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 IMPA1P29218 277 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 COILP38432 576 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 TBPL1P62380 186 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 RPS6KA1Q15418 735 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 QSOX2Q6ZRP7 698 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 MDGA2Q7Z553 956 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 SLC22A16Q86VW1 577 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 CDC20BQ86Y33 519 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 LRRC56Q8IYG6 542 aaPredicted RBP16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 ASB11Q8WXH4 323 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 ATG4AQ8WYN0 398 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 ALKBH8Q96BT7 664 aaKnown RBP16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 CCDC77Q9BR77 488 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 SARGQ9BW04 601 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 CCDC68Q9H2F9 335 aa16.62■□□□□ 0.25
TSPAN3-204ENST00000558394 A0A0G2JNJ9 132 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 A8MVJ9 347 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 SERPIND1P05546 499 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 MPC1LP0DKB6 136 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 GLI4P10075 376 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 UQCRC1P31930 480 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 NPY2RP49146 381 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 SSR4P51571 173 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 OLR1P78380 273 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 CUL1Q13616 776 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 SNTB1Q13884 538 aaKnown RBP16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 KEAP1Q14145 624 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 DEFB134Q4QY38 66 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 CLEC9AQ6UXN8 241 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 UBE2R2Q712K3 238 aaPredicted RBP16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 ARMC10Q8N2F6 343 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 PRELID2Q8N945 189 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 PSD4Q8NDX1 1056 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 SMR3AQ99954 134 aa16.61■□□□□ 0.25
TSPAN3-204ENST00000558394 HPF1Q9NWY4 346 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms