RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 SALL1Q9NSC2 1324 aa4.16□□□□□ -1.74
GPHN-215ENST00000557654 NALCNQ8IZF0 1738 aa4.15□□□□□ -1.74
GPHN-215ENST00000557654 MYH14Q7Z406 1995 aaKnown RBP4.15□□□□□ -1.74
GPHN-215ENST00000557654 RIMBP3CA6NJZ7 1639 aa4.15□□□□□ -1.74
GPHN-215ENST00000557654 RIMBP3BA6NNM3 1639 aa4.15□□□□□ -1.74
GPHN-215ENST00000557654 RIMBP3Q9UFD9 1639 aa4.15□□□□□ -1.74
GPHN-215ENST00000557654 A0A1W2PPK0 400 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 H3BQV1 296 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 SHOX2O60902 331 aaPredicted RBP4.15□□□□□ -1.75
GPHN-215ENST00000557654 TADA2AO75478 443 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 HOXB7P09629 217 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 GATA1P15976 413 aaPredicted RBP4.15□□□□□ -1.75
GPHN-215ENST00000557654 CD22P20273 847 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 PRKACGP22612 351 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 MC5RP33032 325 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 XGP55808 180 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 KRTAP10-3P60369 221 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 TRDNQ13061 729 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 TAF1BQ53T94 588 aaPredicted RBP4.15□□□□□ -1.75
GPHN-215ENST00000557654 DNAJC21Q5F1R6 531 aaKnown RBP4.15□□□□□ -1.75
GPHN-215ENST00000557654 MCM10Q7L590 875 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 CATSPERDQ86XM0 798 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 FBXL16Q8N461 479 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 C4orf45Q96LM5 186 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 LRRC61Q9BV99 259 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 SLC2A11Q9BYW1 496 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 HSD3B7Q9H2F3 369 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.15□□□□□ -1.75
GPHN-215ENST00000557654 CPSF3Q9UKF6 684 aaKnown RBP4.15□□□□□ -1.75
GPHN-215ENST00000557654 MRC1P22897 1456 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 MAP3K15Q6ZN16 1313 aa4.15□□□□□ -1.75
GPHN-215ENST00000557654 ANKARQ7Z5J8 1434 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 A2ML1A8K2U0 1454 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 CCL24O00175 119 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 SOCS3O14543 225 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 PTGESO14684 152 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 JAK2O60674 1132 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 SLCO2B1O94956 709 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 VTNP04004 478 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 NR2F1P10589 423 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 TOP1P11387 765 aaKnown RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 IRF2P14316 349 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 GATA2P23769 480 aaPredicted RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 CMA1P23946 247 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 CASP2P42575 452 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 LHX1P48742 406 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 UBASH3AP57075 661 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 GNG11P61952 73 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 POLR2LP62875 67 aaKnown RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 MYL5Q02045 173 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 GUCY2DQ02846 1103 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 NFATC2Q13469 925 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 ITGA7Q13683 1181 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 SNTB1Q13884 538 aaKnown RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 PHKG1Q16816 387 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 WHAMMP3Q1A5X7 153 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 MTHFSDQ2M296 383 aaKnown RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 HSP90B2PQ58FF3 399 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 TCTEX1D4Q5JR98 221 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 TCTE1Q5JU00 501 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 BEND3Q5T5X7 828 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 ZNF343Q6P1L6 599 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 ZBTB49Q6ZSB9 765 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 PLPPR4Q7Z2D5 763 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 CENPVQ7Z7K6 275 aaPredicted RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 AQP11Q8NBQ7 271 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 SLC37A3Q8NCC5 494 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 LINC00301Q8NCQ3 95 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 MAPK15Q8TD08 544 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 MOB3AQ96BX8 217 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 ZNF274Q96GC6 653 aaPredicted RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 BAG1Q99933 345 aaPredicted RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 CHST11Q9NPF2 352 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 VPS18Q9P253 973 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 C19orf25Q9UFG5 118 aaPredicted RBP4.14□□□□□ -1.75
GPHN-215ENST00000557654 IGSF1Q8N6C5 1336 aa4.14□□□□□ -1.75
GPHN-215ENST00000557654 KDM6AO15550 1401 aaPredicted RBP4.13□□□□□ -1.75
GPHN-215ENST00000557654 PTPRUQ92729 1446 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 NEO1Q92859 1461 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 PEAK1Q9H792 1746 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 A0A0D9SFI3 127 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 EDDM13A0A1B0GTR0 161 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 TMCO5BA8MYB1 307 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 KPNA7A9QM74 516 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 IDH3BO43837 385 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CTDNEP1O95476 244 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 IGHEP01854 428 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CCDC175P0C221 793 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 ACADSP16219 412 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 SHC1P29353 583 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CALCOCO2Q13137 446 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CUL3Q13618 768 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CASP8Q14790 479 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 GPR33Q49SQ1 333 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 GBP6Q6ZN66 633 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 GPRIN3Q6ZVF9 776 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 CNPY4Q8N129 248 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 LYG1Q8N1E2 194 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 SPEM1Q8N4L4 309 aa4.13□□□□□ -1.75
GPHN-215ENST00000557654 Q8NBF4 154 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms