RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 ACMSDQ8TDX5 336 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 UBE2E3Q969T4 207 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 MOCOSQ96EN8 888 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 MRPL57Q9BQC6 102 aaKnown RBP11.84□□□□□ -0.51
SLIRP-211ENST00000557623 SEMA4CQ9C0C4 833 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 CLK4Q9HAZ1 481 aaKnown RBP11.84□□□□□ -0.51
SLIRP-211ENST00000557623 P4HTMQ9NXG6 502 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 XPR1Q9UBH6 696 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 C3orf18Q9UK00 162 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 NAALAD2Q9Y3Q0 740 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 MGAQ8IWI9 3026 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 SCN2AQ99250 2005 aa11.84□□□□□ -0.51
SLIRP-211ENST00000557623 NBEAQ8NFP9 2946 aa11.83□□□□□ -0.51
SLIRP-211ENST00000557623 PCSK5Q92824 1860 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 STX16-NPEPL1H3BU86 382 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 SGK494L7N484 410 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 STX16O14662 325 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 KLHL41O60662 606 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CLEC3AO75596 197 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 KLHL18O94889 574 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 HEXBP07686 556 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CYC1P08574 325 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 IL10P22301 178 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CASP2P42575 452 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CCL11P51671 97 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 EMP2P54851 167 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 VSNL1P62760 191 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 MAT1AQ00266 395 aaKnown RBP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 PCDH1Q08174 1060 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 E2F2Q14209 437 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CPZQ66K79 652 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 WDR93Q6P2C0 686 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 SHISA6Q6ZSJ9 500 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 TEX9Q8N6V9 391 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 OR51Q1Q8NH59 317 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 UTP15Q8TED0 518 aaKnown RBP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 CCT6BQ92526 530 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 ABHD17AQ96GS6 310 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 TRIM55Q9BYV6 548 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 MRPL46Q9H2W6 279 aaKnown RBP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF358Q9NW07 568 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 ASB1Q9Y576 335 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 PCDHGA9Q9Y5G4 932 aaKnown RBP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 HS3ST3B1Q9Y662 390 aa11.83□□□□□ -0.52
SLIRP-211ENST00000557623 TNRC6AQ8NDV7 1962 aaKnown RBP11.83□□□□□ -0.52
SLIRP-211ENST00000557623 A0A088AWK7 358 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 IDSB3KWA1 339 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 UGDHO60701 494 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 GALR3O60755 368 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PRAMEF4O60810 478 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 RDH16O75452 317 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 WFS1O76024 890 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 BMP10O95393 424 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PRB1P04280 392 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 GSTA1P08263 222 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF888P0CJ79 500 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 EPORP19235 508 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TAC1P20366 129 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF10P21506 573 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 SERPINB1P30740 379 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 HNF4AP41235 474 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 FOXL2P58012 376 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TGM3Q08188 693 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 CHAF1BQ13112 559 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 AIMP2Q13155 320 aaKnown RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 RASA2Q15283 850 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 DCAF10Q5QP82 559 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 LIPJQ5W064 366 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TCTN3Q6NUS6 607 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PRSS41Q7RTY9 318 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TDRPQ86YL5 185 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ZC3H7AQ8IWR0 971 aaKnown RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PRSS58Q8IYP2 241 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF843Q8N446 348 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 GAL3ST3Q96A11 431 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 FAR2Q96K12 515 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 OR1F2PQ96R84 312 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 SLC25A23Q9BV35 468 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 RHBGQ9H310 441 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 DCDC2Q9UHG0 476 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ADGRE2Q9UHX3 823 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 ZNF490Q9ULM2 529 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-211ENST00000557623 PCDHGB7Q9Y5F8 929 aa11.82□□□□□ -0.52
SLIRP-211ENST00000557623 LRIT2A6NDA9 550 aa11.81□□□□□ -0.52
SLIRP-211ENST00000557623 E2F3O00716 465 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms