RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 ZNF10P21506 573 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 SERPINB1P30740 379 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 HNF4AP41235 474 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 FOXL2P58012 376 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TGM3Q08188 693 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 CHAF1BQ13112 559 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 AIMP2Q13155 320 aaKnown RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 GTF2H2Q13888 395 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 RASA2Q15283 850 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 SYT16Q17RD7 645 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TUBB8Q3ZCM7 444 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 LACTB2Q53H82 288 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TOR1AIP1Q5JTV8 583 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 DCAF10Q5QP82 559 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 PRAMEF9Q5VWM5 478 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 LIPJQ5W064 366 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TCTN3Q6NUS6 607 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 GTF2H2CQ6P1K8 395 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 MED27Q6P2C8 311 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 EMBQ6PCB8 327 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 PRSS41Q7RTY9 318 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TDRPQ86YL5 185 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 ZC3H7AQ8IWR0 971 aaKnown RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 PRSS58Q8IYP2 241 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF843Q8N446 348 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 PTGR2Q8N8N7 351 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 GAL3ST3Q96A11 431 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 FAR2Q96K12 515 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 OR1F2PQ96R84 312 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 SLC25A23Q9BV35 468 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 RHBGQ9H310 441 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 ATP13A2Q9NQ11 1180 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 HCN3Q9P1Z3 774 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 TBK1Q9UHD2 729 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 DCDC2Q9UHG0 476 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 ADGRE2Q9UHX3 823 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 ZNF490Q9ULM2 529 aaPredicted RBP11.82□□□□□ -0.52
SLIRP-209ENST00000557342 PCDHGB7Q9Y5F8 929 aa11.82□□□□□ -0.52
SLIRP-209ENST00000557342 LRIT2A6NDA9 550 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 E2F3O00716 465 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SOCS6O14544 535 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 FFAR3O14843 346 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 GPR42O15529 346 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 CDH16O75309 829 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 CEACAM4O75871 244 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 DNAJB5O75953 348 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 C1QL1O75973 258 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SHBGP04278 402 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 TUBBP07437 444 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SMIM10L1P0DMW3 83 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 ACPPP15309 386 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 CD22P20273 847 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 HSD17B3P37058 310 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 XCR1P46094 333 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SNRPNP63162 240 aaKnown RBP11.81□□□□□ -0.52
SLIRP-209ENST00000557342 HYAL2Q12891 473 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 NFATC3Q12968 1075 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 DEFB134Q4QY38 66 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 MFSD4BQ5TF39 518 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 GRHL2Q6ISB3 625 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 KIRREL2Q6UWL6 708 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 GOLGA7Q7Z5G4 137 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 LAPTM4BQ86VI4 370 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 PDSS2Q86YH6 399 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 HPS6Q86YV9 775 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SRFBP1Q8NEF9 429 aaKnown RBP11.81□□□□□ -0.52
SLIRP-209ENST00000557342 MZB1Q8WU39 189 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 METTL21AQ8WXB1 218 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 REPS1Q96D71 796 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 PHF21BQ96EK2 531 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 SMIM10Q96HG1 83 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 KLHL31Q9H511 634 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 ACTR8Q9H981 624 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 PRM3Q9NNZ6 103 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 FBXL4Q9UKA2 621 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 MKL2Q9ULH7 1088 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 IGSF10Q6WRI0 2623 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 DOCK10Q96BY6 2186 aa11.81□□□□□ -0.52
SLIRP-209ENST00000557342 COL6A6A6NMZ7 2263 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 B8ZZF3 427 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ALOX12BO75342 701 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 SIX3O95343 332 aaPredicted RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 HPP00738 406 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PYGBP11216 843 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PCNAP12004 261 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 KRT15P19012 456 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 JAK1P23458 1154 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 EEF1DP29692 281 aaKnown RBP11.8□□□□□ -0.52
SLIRP-209ENST00000557342 SLCO1A2P46721 670 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PGDP52209 483 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 SOX8P57073 446 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 RAB8AP61006 207 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 PHEXP78562 749 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ERCC6LQ2NKX8 1250 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 ADPRMQ3LIE5 342 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 MINDY4Q4G0A6 757 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 IRAK1BP1Q5VVH5 260 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 TRIM40Q6P9F5 258 aa11.8□□□□□ -0.52
SLIRP-209ENST00000557342 NDUFAF7Q7L592 441 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms