RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 FAM57AQ8TBR7 257 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 SCMH1Q96GD3 660 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF764Q96H86 408 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 LINC00615Q96LM1 132 aaPredicted RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 OR2A14Q96R47 310 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 C11orf70Q9BRQ4 267 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 GPATCH1Q9BRR8 931 aaKnown RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 WWP1Q9H0M0 922 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 TOR3AQ9H497 397 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 GOLPH3LQ9H4A5 285 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 MVB12BQ9H7P6 319 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 ZWILCHQ9H900 591 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 IL26Q9NPH9 171 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 RBM22Q9NW64 420 aaKnown RBP eCLIP4.45□□□□□ -1.76e-8■■□□□ 13.5
SCFD1-223ENST00000557076 EURLQ9NYK6 297 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 LRFN1Q9P244 771 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 HOOK1Q9UJC3 728 aaKnown RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 C3orf18Q9UK00 162 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 NOCTQ9UK39 431 aaKnown RBP4.45□□□□□ -1.7
SCFD1-223ENST00000557076 DNAJC13O75165 2243 aa4.45□□□□□ -1.7
SCFD1-223ENST00000557076 NOTCH1P46531 2555 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 IGLV3-12A0A075B6K2 115 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 LOC102723996A0A087X1L8 192 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 IGHV1-45A0A0A0MS14 117 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 GRID2IPA4D2P6 1211 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 A6NNC1 897 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 USP27XA6NNY8 438 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ZAR1LA6NP61 321 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 MMP2P08253 660 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ITGAMP11215 1152 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 COX6A1P12074 109 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ATP1A3P13637 1013 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 UCHL3P15374 230 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 GYPEP15421 78 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 NR4A1P22736 598 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CCNCP24863 283 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 EEF1DP29692 281 aaKnown RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 HMGCLP35914 325 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TMPRSS15P98073 1019 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 OGDHQ02218 1023 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 DSC2Q02487 901 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 OCA2Q04671 838 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 HNRNPA0Q13151 305 aaKnown RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TIGD2Q4W5G0 525 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 BOLA3Q53S33 107 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TFDP3Q5H9I0 405 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 PPP6R3Q5H9R7 873 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ACER2Q5QJU3 275 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ZDHHC20Q5W0Z9 365 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ALS2CLQ60I27 953 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ISM2Q6H9L7 571 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TIGD7Q6NT04 549 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 HMBOX1Q6NT76 420 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 DCUN1D2Q6PH85 259 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 SARM1Q6SZW1 724 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 C16orf47Q6ZP98 133 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 SHISA6Q6ZSJ9 500 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 NLRP9Q7RTR0 991 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CREBRFQ8IUR6 639 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CCDC71Q8IV32 467 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 VRK3Q8IV63 474 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CFAP206Q8IYR0 622 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CIARTQ8N365 385 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ATPAF2Q8N5M1 289 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 HORMAD2Q8N7B1 307 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TMEM178AQ8NBL3 297 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 MDS2Q8NDY4 140 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 DDHD1Q8NEL9 900 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 STT3BQ8TCJ2 826 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 FAM222BQ8WU58 562 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 MAML1Q92585 1016 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 C8orf44Q96CB5 159 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 C16orf92Q96LL3 132 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 IMMP1LQ96LU5 166 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF354BQ96LW1 612 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TIGD1Q96MW7 591 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TSGA13Q96PP4 275 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 PCDHB18PQ96TA0 734 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 OLFM1Q99784 485 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 MESP1Q9BRJ9 268 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 SNRNP25Q9BV90 132 aaKnown RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 GPR63Q9BZJ6 419 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF700Q9H0M5 742 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 THAP2Q9H0W7 228 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 PLEKHF2Q9H8W4 249 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ETNK2Q9NVF9 386 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 OR6C2Q9NZP2 312 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 CTSFQ9UBX1 484 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ZNF282Q9UDV7 671 aaPredicted RBP4.44□□□□□ -1.7
SCFD1-223ENST00000557076 PCSK1NQ9UHG2 260 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 MAN1B1Q9UKM7 699 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 SHOC2Q9UQ13 582 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 ANK2Q01484 3957 aa4.44□□□□□ -1.7
SCFD1-223ENST00000557076 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.44□□□□□ -1.73e-7■■■■■ 74.6
SCFD1-223ENST00000557076 HRNRQ86YZ3 2850 aaPredicted RBP4.43□□□□□ -1.7
SCFD1-223ENST00000557076 HCFC1P51610 2035 aa4.43□□□□□ -1.7
SCFD1-223ENST00000557076 A0A0J9YY10 115 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms