RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NR0B1P51843 470 aaKnown RBP13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SESN2P58004 480 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-219ENST00000556432 CRADDP78560 199 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 KEAP1Q14145 624 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 KCNJ11Q14654 390 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SPA17Q15506 151 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SLC25A35Q3KQZ1 300 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 PAMR1Q6UXH9 720 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 MDGA2Q7Z553 956 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SDCCAG8Q86SQ7 713 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-219ENST00000556432 REXO1L1PQ8IX06 675 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 SLC13A3Q8WWT9 602 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 ALG3Q92685 438 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 TBC1D20Q96BZ9 403 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 MBD6Q96DN6 1003 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 THAP11Q96EK4 314 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 PTCHD1Q96NR3 888 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 TTYH2Q9BSA4 534 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 CCDC177Q9NQR7 707 aaPredicted RBP13.01□□□□□ -0.33
ACTN1-219ENST00000556432 FBXW2Q9UKT8 454 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 PCDHA13Q9Y5I0 950 aa13.01□□□□□ -0.33
ACTN1-219ENST00000556432 FN1P02751 2386 aaKnown RBP13□□□□□ -0.33
ACTN1-219ENST00000556432 KCNE1BA0A087WTH5 132 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 A0A0G2JNJ9 132 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 SAGE2PA6NJ88 616 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 A6NNC1 897 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 KIAA1324LA8MWY0 1029 aaPredicted RBP13□□□□□ -0.33
ACTN1-219ENST00000556432 BCKDKO14874 412 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 RAF1P04049 648 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 APRTP07741 180 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 GLI4P10075 376 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 HRH2P25021 359 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 OLR1P78380 273 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 HYAL2Q12891 473 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 GBX1Q14549 363 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 HERC3Q15034 1050 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 DEFB113Q30KQ7 82 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 PCID2Q5JVF3 399 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 RNF187Q5TA31 235 aaPredicted RBP13□□□□□ -0.33
ACTN1-219ENST00000556432 MRNIPQ6NTE8 343 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 SLC26A11Q86WA9 606 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 CNGA4Q8IV77 575 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 BIRC8Q96P09 236 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 DMRT3Q9NQL9 472 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 RAB6BQ9NRW1 208 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 KCMF1Q9P0J7 381 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 GALPQ9UBC7 116 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 Q9UFV3 132 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 ACAD8Q9UKU7 415 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 CRYL1Q9Y2S2 319 aa13□□□□□ -0.33
ACTN1-219ENST00000556432 HRNRQ86YZ3 2850 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-219ENST00000556432 GOLGA8KD6RF30 607 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 GOLGA8TH3BQL2 631 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ITGA10O75578 1167 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ESR1P03372 595 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SERPIND1P05546 499 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 MAOAP21397 527 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 GRK3P35626 688 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SKP1P63208 163 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 TTLL9Q3SXZ7 439 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 CAPN13Q6MZZ7 669 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SLC22A16Q86VW1 577 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 LIX1LQ8IVB5 337 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 VSTM4Q8IW00 320 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 FBXO15Q8NCQ5 510 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SLC35B2Q8TB61 432 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ATG4AQ8WYN0 398 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 LPGAT1Q92604 370 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SLCO2A1Q92959 643 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ALKBH8Q96BT7 664 aaKnown RBP12.99□□□□□ -0.33
ACTN1-219ENST00000556432 ZNF395Q9H8N7 513 aaPredicted RBP12.99□□□□□ -0.33
ACTN1-219ENST00000556432 FAM215AQ9Y5M1 114 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 SLC22A7Q9Y694 548 aa12.99□□□□□ -0.33
ACTN1-219ENST00000556432 OR14I1A6ND48 311 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 A8MVJ9 347 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 AKR1B15C9JRZ8 316 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-219ENST00000556432 G3V3Y1 287 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PSMD12O00232 456 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-219ENST00000556432 NDUFS4O43181 175 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 CHST10O43529 356 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 ZBTB14O43829 449 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 VAPBO95292 243 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 HEXAP06865 529 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 NMBRP28336 390 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PCSK6P29122 969 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 ADH7P40394 386 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PEX19P40855 299 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 SSR4P51571 173 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 TBPL1P62380 186 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 BTG2P78543 158 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 MEF2AQ02078 507 aaPredicted RBP12.98□□□□□ -0.33
ACTN1-219ENST00000556432 CUL1Q13616 776 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 DEFB134Q4QY38 66 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 FLYWCH1Q4VC44 716 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 C17orf64Q86WR6 236 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PRIMA1Q86XR5 153 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 PSD4Q8NDX1 1056 aa12.98□□□□□ -0.33
ACTN1-219ENST00000556432 NANOS1Q8WY41 292 aaKnown RBP12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms