RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 RPS27LQ71UM5 84 aaKnown RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 DPP10Q8N608 796 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 FNDC5Q8NAU1 212 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 FAM46DQ8NEK8 389 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 OR9I1Q8NGQ6 314 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 EEF1AKMT1Q8WVE0 214 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 OR1E3Q8WZA6 343 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 C3orf30Q96M34 536 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 NSUN5Q96P11 429 aaKnown RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 COPS8Q99627 209 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 APOOQ9BUR5 198 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 EPB41L1Q9H4G0 881 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 COPS7BQ9H9Q2 264 aaPredicted RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 OCIAD1Q9NX40 245 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 KLQ9UEF7 1012 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 MOSPD1Q9UJG1 213 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 EIF3LQ9Y262 564 aaKnown RBP10.7□□□□□ -0.7
SHMT2-216ENST00000554975 AP4B1Q9Y6B7 739 aa10.7□□□□□ -0.7
SHMT2-216ENST00000554975 DIDO1Q9BTC0 2240 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 DHRS12A0PJE2 317 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 DPPA5A6NC42 116 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 PRORSD1PA6NEY8 169 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TMEM202A6NGA9 273 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 NCF1BA6NI72 391 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 NCF1CA8MVU1 366 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 K7EPI3 171 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CACNB4O00305 520 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TOR1BO14657 336 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 SLC16A5O15375 505 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 OR1I1O60431 355 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 GMNNO75496 209 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 SORBS2O94875 1100 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 OR4F21O95013 312 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CPNE6O95741 557 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CLDN1O95832 211 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 KRT6AP02538 564 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 PDGFAP04085 211 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 KRT6BP04259 564 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 ANXA5P08758 320 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 LINC00032P0C843 101 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 EBLN1P0CF75 366 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 NCF1P14598 390 aaPredicted RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CSF2RBP32927 897 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 KRT6CP48668 564 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 POLR2JP52435 117 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 FOLH1Q04609 750 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 ZNF33BQ06732 778 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 PTPRRQ15256 657 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 LRRC36Q1X8D7 754 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 GGTA1PQ4G0N0 100 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 C6orf10Q5SRN2 563 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 INTS11Q5TA45 600 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CACHD1Q5VU97 1274 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 IL23RQ5VWK5 629 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 OR52E8Q6IFG1 317 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 RNF111Q6ZNA4 994 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 NEK10Q6ZWH5 1172 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TIPARPQ7Z3E1 657 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 GOLGA7Q7Z5G4 137 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TAF8Q7Z7C8 310 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 FUNDC1Q8IVP5 155 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 RAVER1Q8IY67 606 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 EFCAB3Q8N7B9 438 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 RNF148Q8N7C7 305 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 ANKFN1Q8N957 763 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 PLA2G15Q8NCC3 412 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 METTL6Q8TCB7 284 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 APOBEC4Q8WW27 367 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 LRRC58Q96CX6 371 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 NUS1Q96E22 293 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 SCRN2Q96FV2 425 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 WDR92Q96MX6 357 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TSC22D3Q99576 134 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 SH3GL1Q99961 368 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 HAUS8Q9BT25 410 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 C9orf16Q9BUW7 83 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 MRPS26Q9BYN8 205 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 SPRY4Q9C004 299 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TMEM168Q9H0V1 697 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TUBB1Q9H4B7 451 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 FGF22Q9HCT0 170 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 TMEM9Q9P0T7 183 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 PILRAQ9UKJ1 303 aa10.69□□□□□ -0.7
SHMT2-216ENST00000554975 CNOT6Q9ULM6 557 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 MRPS18BQ9Y676 258 aaKnown RBP10.69□□□□□ -0.7
SHMT2-216ENST00000554975 APCP25054 2843 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 CELSR1Q9NYQ6 3014 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 IGLV3-16A0A075B6K0 115 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NPIPB15A6NHN6 443 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 FXYD1O00168 92 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NME4O00746 187 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 NUDT21O43809 227 aaKnown RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AHCYL1O43865 530 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 AP2A2O94973 939 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 SLC25A14O95258 325 aaPredicted RBP10.68□□□□□ -0.7
SHMT2-216ENST00000554975 TNFP01375 233 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 LINGO3P0C6S8 592 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 FAM58BPP0C7Q3 252 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 ACPPP15309 386 aa10.68□□□□□ -0.7
SHMT2-216ENST00000554975 EPB42P16452 691 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms