RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 ERVK-6Q9BXR3 956 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 TRIM4Q9C037 500 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GSTO2Q9H4Y5 243 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 ACSS2Q9NR19 701 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 MRGBPQ9NV56 204 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 SPATA7Q9P0W8 599 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 IFT80Q9P2H3 777 aaPredicted RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 DHCR7Q9UBM7 475 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 NDOR1Q9UHB4 597 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 BAIAP2L1Q9UHR4 511 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 TRMT6Q9UJA5 497 aaKnown RBP11.88□□□□□ -0.51
SHMT2-214ENST00000554604 TP53TG5Q9Y2B4 290 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 BSNQ9UPA5 3926 aa11.88□□□□□ -0.51
SHMT2-214ENST00000554604 GOLGA8QA0A0J9YX86 632 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 GOLGA8OA6NCC3 632 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ARGFXA6NJG6 315 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 SYCE1LA8MT33 242 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 A8MUI8 341 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ARHGEF33A8MVX0 844 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 GOLGA8NF8WBI6 632 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 H3BMH7 237 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 PYCARD-AS1I3L0S3 204 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 KLK8O60259 260 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 PSIP1O75475 530 aaKnown RBP11.87□□□□□ -0.51
SHMT2-214ENST00000554604 DNAJB5O75953 348 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CAPN1P07384 714 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CTSBP07858 339 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CD63P08962 238 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CBSLP0DN79 551 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CCND1P24385 295 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 PSMB5P28074 263 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CBSP35520 551 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 KCNC1P48547 511 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CLCN7P51798 805 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ARSFP54793 590 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 NAA25Q14CX7 972 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 OR4D1Q15615 310 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CYP2A13Q16696 494 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 LSM12Q3MHD2 195 aaKnown RBP11.87□□□□□ -0.51
SHMT2-214ENST00000554604 UNC50Q53HI1 259 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 TCTE1Q5JU00 501 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 SH2D4BQ5SQS7 431 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 FAM69BQ5VUD6 431 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 TCTN3Q6NUS6 607 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 NEK10Q6ZWH5 1172 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 RAB43Q86YS6 212 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 OR2L3Q8NG85 312 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 HMGCLL1Q8TB92 370 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 AGR3Q8TD06 166 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 MCUR1Q96AQ8 359 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 CMTM5Q96DZ9 223 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 MOCOSQ96EN8 888 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 PDLIM5Q96HC4 596 aaKnown RBP11.87□□□□□ -0.51
SHMT2-214ENST00000554604 OR52B2Q96RD2 323 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ACAT2Q9BWD1 397 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ING2Q9H160 280 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ZNF385DQ9H6B1 395 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 KLHL42Q9P2K6 505 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 ANAPC2Q9UJX6 822 aa11.87□□□□□ -0.51
SHMT2-214ENST00000554604 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
SHMT2-214ENST00000554604 DOCK10Q96BY6 2186 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ZNF839A8K0R7 811 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 STX16-NPEPL1H3BU86 382 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 SDHDO14521 159 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 STX16O14662 325 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 PRICKLE3O43900 615 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ENO3P13929 434 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 MTHFD2P13995 350 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 NCF2P19878 526 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CMPK1P30085 196 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 OTX2P32243 289 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 HSD17B2P37059 387 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 FOLR3P41439 243 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CCL11P51671 97 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 RAP1GDS1P52306 607 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 IL2P60568 153 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CHAF1BQ13112 559 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 KLF10Q13118 480 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 GRM7Q14831 915 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 SLC9A5Q14940 896 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ARHGAP19Q14CB8 494 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 HERC3Q15034 1050 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 NKAIN1Q4KMZ8 207 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ZNF385CQ66K41 422 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CPZQ66K79 652 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 FCRL6Q6DN72 434 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 TTLL10Q6ZVT0 673 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ASB18Q6ZVZ8 466 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CUZD1Q86UP6 607 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 PTGR2Q8N8N7 351 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 TTC29Q8NA56 475 aaPredicted RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 TEX19Q8NA77 164 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 RBM15BQ8NDT2 890 aaKnown RBP11.86□□□□□ -0.51
SHMT2-214ENST00000554604 OR2A1Q8NGT9 310 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 CD200R1Q8TD46 325 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 ACTRT2Q8TDY3 377 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 SMPDL3AQ92484 453 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 PHF21BQ96EK2 531 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 GBP5Q96PP8 586 aa11.86□□□□□ -0.51
SHMT2-214ENST00000554604 SLC30A3Q99726 388 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms