RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 ZNF470Q6ECI4 717 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CAPN13Q6MZZ7 669 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF549Q6P9A3 640 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CYHR1Q6ZMK1 362 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 MBOAT1Q6ZNC8 495 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 UBE2R2Q712K3 238 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 KIAA1328Q86T90 577 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 SLC13A5Q86YT5 568 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 CPNE9Q8IYJ1 553 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF740Q8NDX6 193 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 NFAM1Q8NET5 270 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 OR52N2Q8NGI0 321 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 C16orf52Q8NHV5 167 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 ALKBH8Q96BT7 664 aaKnown RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 TBC1D20Q96BZ9 403 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 FOXC2Q99958 501 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 FRMD8P1Q9BZ68 369 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 TRIM5Q9C035 493 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 LIME1Q9H400 295 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 GSX1Q9H4S2 264 aaPredicted RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PLSCR2Q9NRY7 297 aa8.49□□□□□ -1.05
SYNE2-209ENST00000553308 DRG1Q9Y295 367 aaKnown RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 PRRC2AP48634 2157 aaKnown RBP8.49□□□□□ -1.05
SYNE2-209ENST00000553308 SPG11Q96JI7 2443 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 TCRBV7S3A2A0A539 114 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 USP27XA6NNY8 438 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 A8MUA0 341 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 KLRC4-KLRK1H3BQV0 150 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CDK2AP1O14519 115 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 NDUFS4O43181 175 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ZBTB14O43829 449 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 KLK8O60259 260 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 AVILO75366 819 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ENO3P13929 434 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 JAK1P23458 1154 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 TERF1P54274 439 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 PPP2R2AP63151 447 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 FOLH1Q04609 750 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 FOXD4Q12950 439 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CTBP1Q13363 440 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 HERC3Q15034 1050 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 SIX1Q15475 284 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CEBPEQ15744 281 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 NEPROQ6NW34 567 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ARHGAP11AQ6P4F7 1023 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 MDGA2Q7Z553 956 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 C17orf64Q86WR6 236 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 DENND6AQ8IWF6 608 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CYP4Z2PQ8N1L4 340 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ARMC10Q8N2F6 343 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 AFAP1L2Q8N4X5 818 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ZFP62Q8NB50 900 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 MFSD9Q8NBP5 474 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CHDHQ8NE62 594 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 OR5M3Q8NGP4 307 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 CD200R1Q8TD46 325 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 KCNJ9Q92806 393 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 PTCHD1Q96NR3 888 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 GPR21Q99679 349 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 DEFB126Q9BYW3 111 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ATG10Q9H0Y0 220 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 DEFB127Q9H1M4 99 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 NECTIN3Q9NQS3 549 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 FBXO6Q9NRD1 293 aaPredicted RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 DEPPQ9NTK1 212 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 INTS10Q9NVR2 710 aaKnown RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 DNAJB12Q9NXW2 375 aaKnown RBP8.48□□□□□ -1.05
SYNE2-209ENST00000553308 KLHL42Q9P2K6 505 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 ADAMTS6Q9UKP5 1117 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 VPS9D1Q9Y2B5 631 aa8.48□□□□□ -1.05
SYNE2-209ENST00000553308 IGKV3D-11A0A0A0MRZ8 115 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 TRBV11-1A0A0K0K1C0 115 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 FAM237BA0A1B0GVD1 139 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 TCRBV16S1A1N1A0A5B0 115 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 CTAGE9A4FU28 777 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PINLYPA6NC86 204 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 FAM166BA8MTA8 275 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 NPIPA2E9PIF3 369 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 NPIPA3F8WFD2 350 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 AP3B1O00203 1094 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 CEP104O60308 925 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ITGA10O75578 1167 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 SERPIND1P05546 499 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ZNF888P0CJ79 500 aaPredicted RBP8.47□□□□□ -1.05
SYNE2-209ENST00000553308 DRD2P14416 443 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ALOX12P18054 663 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 PAMP19021 973 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 GRK3P35626 688 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 DLX5P56178 289 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 HYAL2Q12891 473 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 NAE1Q13564 534 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 SNTB1Q13884 538 aaKnown RBP8.47□□□□□ -1.05
SYNE2-209ENST00000553308 AGTRAPQ6RW13 159 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 LCTLQ6UWM7 567 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 QSOX2Q6ZRP7 698 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 ZZZ3Q8IYH5 903 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 CLYBLQ8N0X4 340 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 TMEM156Q8N614 296 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 APCDD1LQ8NCL9 501 aa8.47□□□□□ -1.05
SYNE2-209ENST00000553308 OR5M9Q8NGP3 310 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms