RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 OR10T2Q8NGX3 314 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 GRHL3Q8TE85 626 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 NSL1Q96IY1 281 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 BTBD9Q96Q07 612 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 UBAC1Q9BSL1 405 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 TCHPQ9BT92 498 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 TRIM6Q9C030 488 aaPredicted RBP5.3□□□□□ -1.56
SCFD1-208ENST00000553278 DPEP2Q9H4A9 486 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 DPEP3Q9H4B8 488 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 RAVER2Q9HCJ3 691 aaKnown RBP5.3□□□□□ -1.56
SCFD1-208ENST00000553278 VPS54Q9P1Q0 977 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 MYO6Q9UM54 1294 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 TNNQ9UQP3 1299 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 MFHAS1Q9Y4C4 1052 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 COX11Q9Y6N1 276 aa5.3□□□□□ -1.56
SCFD1-208ENST00000553278 KDRP35968 1356 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 NCANO14594 1321 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 LY6G6EA0A0G2JKS1 128 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 TRIM49BA6NDI0 452 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 C2CD4DB7Z1M9 353 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 ZNF587BE7ETH6 402 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 H3BMM5 538 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 UBXN8O00124 270 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CCL24O00175 119 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PRRG2O14669 202 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SLC22A2O15244 555 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 OGTO15294 1046 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CHADO15335 359 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SYT7O43581 403 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 VPS26AO75436 327 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PRAMEF12O95522 483 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PRSS2P07478 247 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 HOXC6P09630 235 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 EPB41P11171 864 aaKnown RBP5.29□□□□□ -1.56
SCFD1-208ENST00000553278 GP1BBP13224 206 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 HLA-DOBP13765 273 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CD59P13987 128 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 ANPEPP15144 967 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 B4GALT1P15291 398 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 EPHA2P29317 976 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 ALDH4A1P30038 563 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PCYT1AP49585 367 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 TRAF3Q13114 568 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CHIT1Q13231 466 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 RIPK1Q13546 671 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 NFATC4Q14934 902 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 TAF13Q15543 124 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 MTX3Q5HYI7 312 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 WBP2NLQ6ICG8 309 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SULT1C3Q6IMI6 304 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CENPPQ6IPU0 288 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SATL1Q86VE3 508 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PLD3Q8IV08 490 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CERS5Q8N5B7 392 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 LRRC17Q8N6Y2 441 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 BCORP1Q8N888 145 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 MINDY2Q8NBR6 621 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 TRPV3Q8NET8 790 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 OR4C15Q8NGM1 316 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 HSD17B8Q92506 261 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 GLYATL1Q969I3 302 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 GPR137Q96N19 417 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 PCDHB18PQ96TA0 734 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 POLR1EQ9GZS1 481 aaKnown RBP5.29□□□□□ -1.56
SCFD1-208ENST00000553278 EGLN1Q9GZT9 426 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 RAB33BQ9H082 229 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CSTL1Q9H114 145 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 GANQ9H2C0 597 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SDR39U1Q9NRG7 319 aaPredicted RBP5.29□□□□□ -1.56
SCFD1-208ENST00000553278 EXOC1Q9NV70 894 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 ATXN10Q9UBB4 475 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 WNT16Q9UBV4 365 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 IL36AQ9UHA7 158 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 SMC3Q9UQE7 1217 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 CHMP2BQ9UQN3 213 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 COLEC10Q9Y6Z7 277 aa5.29□□□□□ -1.56
SCFD1-208ENST00000553278 MYH14Q7Z406 1995 aaKnown RBP5.29□□□□□ -1.56
SCFD1-208ENST00000553278 A0A1W2PPI3 338 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 TMEM89A2RUT3 159 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 CTAGE9A4FU28 777 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 CCDC169A6NNP5 214 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 MAPK13O15264 365 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 SYNGR3O43761 229 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 TLX2O43763 284 aaPredicted RBP5.28□□□□□ -1.56
SCFD1-208ENST00000553278 LRP3O75074 770 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 SPAG6O75602 509 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 BAG4O95429 457 aaKnown RBP5.28□□□□□ -1.56
SCFD1-208ENST00000553278 SYNGR4O95473 234 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 CTAGE8P0CG41 777 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 PSG1P11464 419 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 GNSP15586 552 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 CA4P22748 312 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 LHCGRP22888 699 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 GLRA2P23416 452 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 SULT1E1P49888 294 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 GEMP55040 296 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 CDH11P55287 796 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 HERV-K104P63124 156 aa5.28□□□□□ -1.56
SCFD1-208ENST00000553278 RPL24P83731 157 aaKnown RBP5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms