RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 FAM110AQ9BQ89 295 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 C17orf62Q9BQA9 187 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 ACBD6Q9BR61 282 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 MXRA8Q9BRK3 442 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 ZNF768Q9H5H4 540 aaKnown RBP3.98□□□□□ -1.77
USP44-208ENST00000552440 GEMIN7Q9H840 131 aaKnown RBP3.98□□□□□ -1.77
USP44-208ENST00000552440 UCK1Q9HA47 277 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 TBC1D17Q9HA65 648 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 SGK2Q9HBY8 427 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 PDGFCQ9NRA1 345 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 DPP3Q9NY33 737 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 GCNT4Q9P109 453 aa3.98□□□□□ -1.77
USP44-208ENST00000552440 SYNJ2O15056 1496 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 HEG1Q9ULI3 1381 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 HECW2Q9P2P5 1572 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 A0A087WUV0 522 aaPredicted RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 KANSL1LA0AUZ9 987 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 TMEM8BA6NDV4 472 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ANKUB1A6NFN9 424 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 TMEM221A6NGB7 291 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PCP4L1A6NKN8 68 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 HSPB2A8KAH6 182 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 RNASET2O00584 256 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 ABCD4O14678 606 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 HDAC3O15379 428 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PSMD3O43242 534 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CHMP2AO43633 222 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 SDC3O75056 442 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 LRP3O75074 770 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 DFFBO76075 338 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CDK14O94921 469 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PIGNO95427 931 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CA3P07451 260 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ALPIP09923 528 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CREB1P16220 341 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PRDX2P32119 198 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 RORAP35398 523 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 FDFT1P37268 417 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CDX1P47902 265 aaPredicted RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 LHX1P48742 406 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CSNK1EP49674 416 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 ACADVLP49748 655 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PLCD1P51178 756 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 BCAP31P51572 246 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 GSCP56915 257 aaPredicted RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 BASP1P80723 227 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 NAE1Q13564 534 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CYLC2Q14093 348 aaPredicted RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 HSPB2Q16082 182 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ZSCAN26Q16670 478 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CYP1B1Q16678 543 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PCID2Q5JVF3 399 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 TSTD2Q5T7W7 516 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 HECTD2Q5U5R9 776 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PLCXD3Q63HM9 321 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CLEC6AQ6EIG7 209 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ASPHD2Q6ICH7 369 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ARMC6Q6NXE6 501 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 FBXO42Q6P3S6 717 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CBLN3Q6UW01 205 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 BTNL8Q6UX41 500 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 DPY19L3Q6ZPD9 716 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 KCTD8Q6ZWB6 473 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 EIF3MQ7L2H7 374 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 LUZP2Q86TE4 346 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 LINC00523Q86TU6 105 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 MEX3DQ86XN8 651 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 FOXRED2Q8IWF2 684 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 APCDD1Q8J025 514 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 EXD3Q8N9H8 876 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 FAM47BQ8NA70 645 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ZNF596Q8TC21 504 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 PNPT1Q8TCS8 783 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 GLYATL2Q8WU03 294 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 AKAP1Q92667 903 aaKnown RBP eCLIP3.97□□□□□ -1.77
USP44-208ENST00000552440 CELF1Q92879 486 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 R3HDM4Q96D70 268 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ZC3HAV1LQ96H79 300 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 TEFMQ96QE5 360 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 ACOX2Q99424 681 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 MTERF1Q99551 399 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 RTP3Q9BQQ7 232 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CHRDL1Q9BU40 450 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 IFT27Q9BW83 186 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 IDI2Q9BXS1 227 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 NUSAP1Q9BXS6 441 aaKnown RBP3.97□□□□□ -1.77
USP44-208ENST00000552440 WWTR1Q9GZV5 400 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ADNPQ9H2P0 1102 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 FBXO44Q9H4M3 255 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 LRRC19Q9H756 370 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 RAB9BQ9NP90 201 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 TMEM74BQ9NUR3 256 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ERVK-18Q9QC07 812 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 COPS7AQ9UBW8 275 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 CTSFQ9UBX1 484 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 ATPIF1Q9UII2 106 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 FOXJ3Q9UPW0 622 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 SLC22A14Q9Y267 594 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 GAPVD1Q14C86 1478 aa3.97□□□□□ -1.77
USP44-208ENST00000552440 TCRBV7S3A2A0A539 114 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms