RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 EPS8L3Q8TE67 593 aaKnown RBP17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 FAR2Q96K12 515 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 SLC6A16Q9GZN6 736 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 ACTR8Q9H981 624 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 P4HTMQ9NXG6 502 aa17.51■□□□□ 0.39
PRPF40B-216ENST00000552301 A0A088AWK7 358 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 GALR3O60755 368 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 DNAJB5O75953 348 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 SIX3O95343 332 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 TUBBP07437 444 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 GSTA1P08263 222 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 PCNAP12004 261 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 EPORP19235 508 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 ZNF10P21506 573 aaPredicted RBP17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 XCR1P46094 333 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 CCL11P51671 97 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 EMP2P54851 167 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 RAB8AP61006 207 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 TGM3Q08188 693 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 MED27Q6P2C8 311 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 GOLGA7Q7Z5G4 137 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 ZC3H7AQ8IWR0 971 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 AFAP1L2Q8N4X5 818 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 CLEC1AQ8NC01 280 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 OR51Q1Q8NH59 317 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 UTP15Q8TED0 518 aaKnown RBP17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 CREB3L4Q8TEY5 395 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 CAVIN3Q969G5 261 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 ATP6V1E2Q96A05 226 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 GAL3ST3Q96A11 431 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 PARD6BQ9BYG5 372 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 TGIF2Q9GZN2 237 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 COPG2Q9UBF2 871 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 SPTA1P02549 2419 aa17.5■□□□□ 0.39
PRPF40B-216ENST00000552301 TLDC2A0PJX2 215 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 LRRC14BA6NHZ5 514 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 IDSB3KWA1 339 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 AGPSO00116 658 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 PRAMEF4O60810 478 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 GLRA3O75311 464 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 NUDT17P0C025 328 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 ACPPP15309 386 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 CD22P20273 847 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 SERPINB1P30740 379 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 CASP2P42575 452 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 SNRPNP63162 240 aaKnown RBP17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 PHEXP78562 749 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 RASA2Q15283 850 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 MINDY4Q4G0A6 757 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 PRAMEF9Q5VWM5 478 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 GRHL2Q6ISB3 625 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 TRIM40Q6P9F5 258 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 PDSS2Q86YH6 399 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 TMEM151BQ8IW70 566 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 RIBC1Q8N443 379 aaPredicted RBP17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 TRIM55Q9BYV6 548 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 SEMA4CQ9C0C4 833 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 SLC25A18Q9H1K4 315 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 IPPKQ9H8X2 491 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 DCDC2Q9UHG0 476 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 FBXL4Q9UKA2 621 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 MKL2Q9ULH7 1088 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 HS3ST3B1Q9Y662 390 aa17.49■□□□□ 0.39
PRPF40B-216ENST00000552301 COL6A6A6NMZ7 2263 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PSMD12O00232 456 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 E2F3O00716 465 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PCDH17O14917 1159 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 ERI3O43414 337 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 UGDHO60701 494 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 WFS1O76024 890 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 BMP10O95393 424 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PRB1P04280 392 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 IL10P22301 178 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 CCNG1P51959 295 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PCDH1Q08174 1060 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 TUBB8Q3ZCM7 444 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 LACTB2Q53H82 288 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 DCAF10Q5QP82 559 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 IRAK1BP1Q5VVH5 260 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 LIPJQ5W064 366 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PPP4R1Q8TF05 950 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 MZB1Q8WU39 189 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 METTL21AQ8WXB1 218 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 REPS1Q96D71 796 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 ABHD17AQ96GS6 310 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 PEX11GQ96HA9 241 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 SLC25A23Q9BV35 468 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 REXO4Q9GZR2 422 aaKnown RBP17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 RHBGQ9H310 441 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 COPS7BQ9H9Q2 264 aaPredicted RBP17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 TMEM216Q9P0N5 145 aa17.48■□□□□ 0.39
PRPF40B-216ENST00000552301 MED13Q9UHV7 2174 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 PIEZO2Q9H5I5 2752 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 A0A1W2PPM1 405 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 LRIT2A6NDA9 550 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 A8MT66 165 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 SOCS6O14544 535 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 OLR1P78380 273 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 HYAL2Q12891 473 aa17.47■□□□□ 0.39
PRPF40B-216ENST00000552301 NFATC3Q12968 1075 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms