RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 A1L4Q6 167 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 CHST10O43529 356 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 PRMT3O60678 531 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 CELA2AP08217 269 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 CD46P15529 392 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 CASP6P55212 293 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR4D2P58180 307 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 TAS2R39P59534 338 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 STXBP1P61764 594 aaKnown RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 REEP5Q00765 189 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 RHAGQ02094 409 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 RBBP5Q15291 538 aaKnown RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZXDCQ2QGD7 858 aaPredicted RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 KRTCAP3Q53RY4 240 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF766Q5HY98 468 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 CATSPEREQ5SY80 951 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 PAPD4Q6PIY7 484 aaKnown RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 TMEM207Q6UWW9 146 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 GFRALQ6UXV0 394 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 QSOX2Q6ZRP7 698 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 LANCL3Q6ZV70 420 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZBED8Q8IZ13 594 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 KRT78Q8N1N4 520 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 FAM98AQ8NCA5 519 aaKnown RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 C7orf57Q8NEG2 295 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 ADAMTS18Q8TE60 1221 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 UTP15Q8TED0 518 aaKnown RBP10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 FAR2Q96K12 515 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 PWWP2AQ96N64 755 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 TAAR6Q96RI8 345 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 KRT12Q99456 494 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 ERP44Q9BS26 406 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 TRIM51Q9BSJ1 452 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 TRIM31Q9BZY9 425 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 DERL2Q9GZP9 239 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 NT5DC2Q9H857 520 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 LANCL2Q9NS86 450 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 GPRC5BQ9NZH0 403 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC17A6Q9P2U8 582 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 SNX24Q9Y343 169 aa10.24□□□□□ -0.77
VTI1BP3-201ENST00000550220 IGHV3-20A0A0C4DH32 117 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 USP27XA6NNY8 438 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 TP73O15350 636 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF888P0CJ79 500 aaPredicted RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 RNF224P0DH78 156 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SMIM10L1P0DMW3 83 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 C1GALT1C1LP0DN25 315 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 RNH1P13489 461 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 RPL21P46778 160 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 EFNA3P52797 238 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 ATP6V0D1P61421 351 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 CAV1Q03135 178 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 RCN2Q14257 317 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 USP10Q14694 798 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZRSR2Q15696 482 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 TMPRSS11BQ86T26 416 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SPNS2Q8IVW8 549 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 KLHDC8AQ8IYD2 350 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 BEST3Q8N1M1 668 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 TMEM178AQ8NBL3 297 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 MOCOSQ96EN8 888 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SMIM10Q96HG1 83 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 PDLIM2Q96JY6 352 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 PTCHD1Q96NR3 888 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 CPNE1Q99829 537 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 WDR83Q9BRX9 315 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 NPLQ9BXD5 320 aaPredicted RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 PHACTR1Q9C0D0 580 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC6A16Q9GZN6 736 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 EHD1Q9H4M9 534 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 RUBCNLQ9H714 662 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 PRDM9Q9NQV7 894 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SUCOQ9UBS9 1254 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 SEC14L3Q9UDX4 400 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 UTP11Q9Y3A2 253 aaKnown RBP10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 MMACHCQ9Y4U1 282 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 PSAT1Q9Y617 370 aa10.23□□□□□ -0.77
VTI1BP3-201ENST00000550220 NPEPPSL1A6NEC2 478 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 ZNF860A6NHJ4 632 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CDC7O00311 574 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CLDN4O14493 209 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CLGNO14967 610 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 B4GALT2O60909 372 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CDC123O75794 336 aaPredicted RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CLDN1O95832 211 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 STMN1P16949 149 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 EEF1DP29692 281 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 GGT5P36269 586 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 CD96P40200 585 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC6A12P48065 614 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TDGF1P3P51864 188 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 SLC26A5P58743 744 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 SNRPNP63162 240 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TGM3Q08188 693 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 LAPTM5Q13571 262 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TUBA3CQ13748 450 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TERF2Q15554 542 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 OR1C1Q15619 314 aa10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 TSNQ15631 228 aaKnown RBP10.22□□□□□ -0.77
VTI1BP3-201ENST00000550220 SULT1C3Q6IMI6 304 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms