RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 HERC3Q15034 1050 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 DEFB134Q4QY38 66 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 CEP97Q8IW35 865 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 CYP4X1Q8N118 509 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 CALML6Q8TD86 181 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 TBC1D20Q96BZ9 403 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 PYCR2Q96C36 320 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 DMRTA2Q96SC8 542 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 FAM129AQ9BZQ8 928 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 IARS2Q9NSE4 1012 aaKnown RBP14.45□□□□□ -0.1
RAB5C-205ENST00000550013 ASB1Q9Y576 335 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 NF1P21359 2839 aa14.45□□□□□ -0.1
RAB5C-205ENST00000550013 SERPIND1P05546 499 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 ZNF888P0CJ79 500 aaPredicted RBP14.44□□□□□ -0.1
RAB5C-205ENST00000550013 MAGEA3P43357 314 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 CDKN2DP55273 166 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 BTG2P78543 158 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 SP140Q13342 867 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 RBM20Q5T481 1227 aaKnown RBP14.44□□□□□ -0.1
RAB5C-205ENST00000550013 PAQR3Q6TCH7 311 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 PALM2Q8IXS6 379 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 LMNTD2Q8IXW0 634 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 MYO1HQ8N1T3 1032 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 ABHD11Q8NFV4 315 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 LINGO1Q96FE5 620 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 SIGLEC10Q96LC7 697 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 OR4K3Q96R72 315 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 OLFM1Q99784 485 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 SPOCK3Q9BQ16 436 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 FAM167BQ9BTA0 163 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 SPNS1Q9H2V7 528 aa14.44□□□□□ -0.1
RAB5C-205ENST00000550013 INTS1Q8N201 2190 aaKnown RBP14.44□□□□□ -0.1
RAB5C-205ENST00000550013 ZFHX3Q15911 3703 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 SPG11Q96JI7 2443 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CTAGE15A4D2H0 777 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 E9PLN8 166 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 PRRG2O14669 202 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 SLC16A5O15375 505 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 TSPAN12O95859 305 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 ALOX12P18054 663 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 MAOAP21397 527 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CCND1P24385 295 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 GABRB3P28472 473 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 RFC3P40938 356 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CYB561P49447 251 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 RGS4P49798 205 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CCR8P51685 355 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 PGGT1BP53609 377 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 ITGA8P53708 1063 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 MLF1P58340 268 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 TLE4Q04727 773 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 TESK1Q15569 626 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CATSPEREQ5SY80 951 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 LRRC8EQ6NSJ5 796 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 UGT3A1Q6NUS8 523 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 MEX3BQ6ZN04 569 aaKnown RBP14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CTAGE6Q86UF2 777 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CDH24Q86UP0 819 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 ACBD4Q8NC06 268 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.43□□□□□ -0.1
RAB5C-205ENST00000550013 C2CD4AQ8NCU7 369 aaPredicted RBP14.43□□□□□ -0.1
RAB5C-205ENST00000550013 OR4K1Q8NGD4 311 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 PHF10Q8WUB8 498 aaKnown RBP14.43□□□□□ -0.1
RAB5C-205ENST00000550013 CHTF18Q8WVB6 975 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 MAGOHBQ96A72 148 aaKnown RBP14.43□□□□□ -0.1
RAB5C-205ENST00000550013 SDCCAG3Q96C92 435 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 C14orf79Q96F83 325 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 PTCHD1Q96NR3 888 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 VKORC1Q9BQB6 163 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 HAUS8Q9BT25 410 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 SARGQ9BW04 601 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 TAS2R13Q9NYV9 303 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 PPT2Q9UMR5 302 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 NEU2Q9Y3R4 380 aa14.43□□□□□ -0.1
RAB5C-205ENST00000550013 ZNF407Q9C0G0 2248 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 TRBC2A0A5B9 178 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 SAGE2PA6NJ88 616 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 A8MUA0 341 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 JAK1P23458 1154 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 HLCSP50747 726 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 PWP1Q13610 501 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 QSOX2Q6ZRP7 698 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 NAT8LQ8N9F0 302 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 NFAM1Q8NET5 270 aaPredicted RBP14.42□□□□□ -0.1
RAB5C-205ENST00000550013 OR56A3Q8NH54 315 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 CA5BP1Q8WTZ4 195 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 SNF8Q96H20 258 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 MS4A14Q96JA4 679 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 ENKD1Q9H0I2 346 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 TRIM45Q9H8W5 580 aaPredicted RBP14.42□□□□□ -0.1
RAB5C-205ENST00000550013 ARL15Q9NXU5 204 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 HCFC1P51610 2035 aa14.42□□□□□ -0.1
RAB5C-205ENST00000550013 TFECO14948 347 aaPredicted RBP14.41□□□□□ -0.1
RAB5C-205ENST00000550013 PRMT3O60678 531 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HIST1H2AGP0C0S8 130 aaPredicted RBP14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HIST1H2ADP20671 130 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 TRHRP34981 398 aaPredicted RBP14.41□□□□□ -0.1
RAB5C-205ENST00000550013 HNF4AP41235 474 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 MEOX1P50221 254 aa14.41□□□□□ -0.1
RAB5C-205ENST00000550013 RAB8AP61006 207 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms