RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CCNT2O60583 730 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PRAMEF10O60809 474 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 STK16O75716 305 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SIX3O95343 332 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ADRB1P08588 477 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 RPS17P08708 135 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 MSL3P1P0C860 447 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 JMJD7P0C870 316 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EBLN1P0CF75 366 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 MYL2P10916 166 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 HGFP14210 728 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EZRP15311 586 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ITIH1P19827 911 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ATP5F1P24539 256 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EEF1DP29692 281 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 GRIA3P42263 894 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 GDF5P43026 501 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PIK3CGP48736 1102 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 HK2P52789 917 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 MAGOHP61326 146 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 HERVK_113P63132 956 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 YBX1P67809 324 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 GABREP78334 506 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 HSD11B2P80365 405 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 REEP5Q00765 189 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TEKQ02763 1124 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PRDX1Q06830 199 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 CYP4F3Q08477 520 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TUBB3Q13509 450 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 KCNAB1Q14722 419 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PCLAFQ15004 111 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PCBP2Q15366 365 aaKnown RBP eCLIP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ZIC1Q15915 447 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TTMPQ5BVD1 217 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TMTC4Q5T4D3 741 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 AGBL2Q5U5Z8 902 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ZNF425Q6IV72 752 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 METTL2BQ6P1Q9 378 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 CYB5D1Q6P9G0 228 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ZYG11AQ6WRX3 759 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 RNF111Q6ZNA4 994 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 RNF44Q7L0R7 432 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EXOC3L1Q86VI1 746 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PAQR7Q86WK9 346 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 MARCH9Q86YJ5 346 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SLC22A9Q8IVM8 553 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 D2HGDHQ8N465 521 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 BMPERQ8N8U9 685 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SNX31Q8N9S9 440 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 BHLHE22Q8NFJ8 381 aaPredicted RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 WDR36Q8NI36 951 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ABHD4Q8TB40 342 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TCP10LQ8TDR4 215 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SLC5A11Q8WWX8 675 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 NEIL2Q969S2 332 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ESAMQ96AP7 390 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TLCD1Q96CP7 247 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 NXPE2Q96DL1 559 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PHF21BQ96EK2 531 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TCTN2Q96GX1 697 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PKNOX2Q96KN3 472 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 FAM111AQ96PZ2 611 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SH3GL2Q99962 352 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 DPH7Q9BTV6 452 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SCNM1Q9BWG6 230 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 ERVK-6Q9BXR3 956 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 CD244Q9BZW8 370 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 CHRNA10Q9GZZ6 450 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 C12orf65Q9H3J6 166 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 FANCEQ9HB96 536 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PDE7BQ9NP56 450 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 GPRC5BQ9NZH0 403 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SLC17A7Q9P2U7 560 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 COPG2Q9UBF2 871 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PISDQ9UG56 409 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PCTPQ9UKL6 214 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SATB2Q9UPW6 733 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 WASF3Q9UPY6 502 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 SLC22A14Q9Y267 594 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 KLHL20Q9Y2M5 609 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PLLPQ9Y342 182 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 NEUROG3Q9Y4Z2 214 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 TNPO3Q9Y5L0 923 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 KCNE2Q9Y6J6 123 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 DSPP15924 2871 aaKnown RBP6.06□□□□□ -1.44
PRKDC-211ENST00000546304 USP24Q9UPU5 2620 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 LOC400499M0QZD8 3231 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 EPG5Q9HCE0 2579 aa6.06□□□□□ -1.44
PRKDC-211ENST00000546304 PKD1L2Q7Z442 2459 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM120BA0PK00 339 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 LRRC14BA6NHZ5 514 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 B4E171 279 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 TMEM150CB9EJG8 249 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 G3V2L1 256 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 DYNC1I1O14576 645 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 HAT1O14929 419 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 TM9SF1O15321 606 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 DLX3O60479 287 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 CTSVO60911 334 aa6.05□□□□□ -1.44
PRKDC-211ENST00000546304 KATNA1O75449 491 aa6.05□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms