RNA–Protein interactions for RNA: ENST00000546298.5

YBX3-218, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-218ENST00000546298 A0A088AWK7 358 aa8.81□□□□□ -1
YBX3-218ENST00000546298 A1L4Q6 167 aa8.81□□□□□ -1
YBX3-218ENST00000546298 TP73O15350 636 aa8.81□□□□□ -1
YBX3-218ENST00000546298 LRRTM2O43300 516 aa8.81□□□□□ -1
YBX3-218ENST00000546298 PRMT3O60678 531 aa8.81□□□□□ -1
YBX3-218ENST00000546298 B4GALT2O60909 372 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CDC123O75794 336 aaPredicted RBP8.81□□□□□ -1
YBX3-218ENST00000546298 MLYCDO95822 493 aa8.81□□□□□ -1
YBX3-218ENST00000546298 F10P00742 488 aa8.81□□□□□ -1
YBX3-218ENST00000546298 C1GALT1C1LP0DN25 315 aa8.81□□□□□ -1
YBX3-218ENST00000546298 RNH1P13489 461 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 ZNF10P21506 573 aaPredicted RBP8.81□□□□□ -1
YBX3-218ENST00000546298 CASQ1P31415 396 aa8.81□□□□□ -1
YBX3-218ENST00000546298 GP5P40197 560 aa8.81□□□□□ -1
YBX3-218ENST00000546298 EFNA3P52797 238 aa8.81□□□□□ -1
YBX3-218ENST00000546298 ATP6V0D1P61421 351 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CAV1Q03135 178 aa8.81□□□□□ -1
YBX3-218ENST00000546298 RBPJQ06330 500 aa8.81□□□□□ -1
YBX3-218ENST00000546298 USP10Q14694 798 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 FASTKD3Q14CZ7 662 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 ZNF324BQ6AW86 544 aaPredicted RBP8.81□□□□□ -1
YBX3-218ENST00000546298 SULT1C3Q6IMI6 304 aa8.81□□□□□ -1
YBX3-218ENST00000546298 H3F3CQ6NXT2 135 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CAPN12Q6ZSI9 719 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CYP4X1Q8N118 509 aa8.81□□□□□ -1
YBX3-218ENST00000546298 LGI4Q8N135 537 aa8.81□□□□□ -1
YBX3-218ENST00000546298 SPATA4Q8NEY3 305 aa8.81□□□□□ -1
YBX3-218ENST00000546298 OR5T3Q8NGG3 340 aa8.81□□□□□ -1
YBX3-218ENST00000546298 UTP15Q8TED0 518 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 RHBDF1Q96CC6 855 aa8.81□□□□□ -1
YBX3-218ENST00000546298 MOCOSQ96EN8 888 aa8.81□□□□□ -1
YBX3-218ENST00000546298 FAR2Q96K12 515 aa8.81□□□□□ -1
YBX3-218ENST00000546298 PTCHD1Q96NR3 888 aa8.81□□□□□ -1
YBX3-218ENST00000546298 TAAR6Q96RI8 345 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CPNE1Q99829 537 aa8.81□□□□□ -1
YBX3-218ENST00000546298 UTP23Q9BRU9 249 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 SLC6A16Q9GZN6 736 aa8.81□□□□□ -1
YBX3-218ENST00000546298 DPH5Q9H2P9 285 aa8.81□□□□□ -1
YBX3-218ENST00000546298 SPNS1Q9H2V7 528 aa8.81□□□□□ -1
YBX3-218ENST00000546298 CNOT10Q9H9A5 744 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 GPRC5BQ9NZH0 403 aa8.81□□□□□ -1
YBX3-218ENST00000546298 IKZF3Q9UKT9 509 aa8.81□□□□□ -1
YBX3-218ENST00000546298 PYCARDQ9ULZ3 195 aa8.81□□□□□ -1
YBX3-218ENST00000546298 UTP11Q9Y3A2 253 aaKnown RBP8.81□□□□□ -1
YBX3-218ENST00000546298 PCDHGB6Q9Y5F9 930 aa8.81□□□□□ -1
YBX3-218ENST00000546298 ANKRD12Q6UB98 2062 aa8.81□□□□□ -1
YBX3-218ENST00000546298 OR2W5A6NFC9 320 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CLGNO14967 610 aa8.8□□□□□ -1
YBX3-218ENST00000546298 WDR47O94967 919 aa8.8□□□□□ -1
YBX3-218ENST00000546298 S100BP04271 92 aaPredicted RBP8.8□□□□□ -1
YBX3-218ENST00000546298 STSP08842 583 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RNF224P0DH78 156 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CD46P15529 392 aa8.8□□□□□ -1
YBX3-218ENST00000546298 STMN1P16949 149 aa8.8□□□□□ -1
YBX3-218ENST00000546298 SSTR1P30872 391 aa8.8□□□□□ -1
YBX3-218ENST00000546298 SPRP35270 261 aaPredicted RBP8.8□□□□□ -1
YBX3-218ENST00000546298 HNF4AP41235 474 aa8.8□□□□□ -1
YBX3-218ENST00000546298 SLC6A12P48065 614 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CASP6P55212 293 aa8.8□□□□□ -1
YBX3-218ENST00000546298 SLC26A5P58743 744 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RAB8AP61006 207 aa8.8□□□□□ -1
YBX3-218ENST00000546298 OLR1P78380 273 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RCN2Q14257 317 aa8.8□□□□□ -1
YBX3-218ENST00000546298 ZNF460Q14592 562 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TGFBIQ15582 683 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TSNQ15631 228 aaKnown RBP8.8□□□□□ -1
YBX3-218ENST00000546298 ZNF766Q5HY98 468 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TOR1AIP1Q5JTV8 583 aa8.8□□□□□ -1
YBX3-218ENST00000546298 GFRALQ6UXV0 394 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TMIGD1Q6UXZ0 262 aa8.8□□□□□ -1
YBX3-218ENST00000546298 SLCO4C1Q6ZQN7 724 aa8.8□□□□□ -1
YBX3-218ENST00000546298 QSOX2Q6ZRP7 698 aa8.8□□□□□ -1
YBX3-218ENST00000546298 C3orf62Q6ZUJ4 267 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RPS19BP1Q86WX3 136 aaKnown RBP8.8□□□□□ -1
YBX3-218ENST00000546298 GPSM1Q86YR5 675 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CRLF3Q8IUI8 442 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CEP97Q8IW35 865 aa8.8□□□□□ -1
YBX3-218ENST00000546298 KLHDC8AQ8IYD2 350 aa8.8□□□□□ -1
YBX3-218ENST00000546298 BEST3Q8N1M1 668 aa8.8□□□□□ -1
YBX3-218ENST00000546298 ANKRD53Q8N9V6 530 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TMEM178AQ8NBL3 297 aa8.8□□□□□ -1
YBX3-218ENST00000546298 FAM98AQ8NCA5 519 aaKnown RBP8.8□□□□□ -1
YBX3-218ENST00000546298 ADAMTS18Q8TE60 1221 aa8.8□□□□□ -1
YBX3-218ENST00000546298 ANKRD49Q8WVL7 239 aa8.8□□□□□ -1
YBX3-218ENST00000546298 CCT6BQ92526 530 aa8.8□□□□□ -1
YBX3-218ENST00000546298 TSLPQ969D9 159 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RELTQ969Z4 430 aa8.8□□□□□ -1
YBX3-218ENST00000546298 GAL3ST3Q96A11 431 aa8.8□□□□□ -1
YBX3-218ENST00000546298 MCMBPQ9BTE3 642 aa8.8□□□□□ -1
YBX3-218ENST00000546298 NPLQ9BXD5 320 aaPredicted RBP8.8□□□□□ -1
YBX3-218ENST00000546298 RBCK1Q9BYM8 510 aa8.8□□□□□ -1
YBX3-218ENST00000546298 PHACTR1Q9C0D0 580 aa8.8□□□□□ -1
YBX3-218ENST00000546298 RAB17Q9H0T7 212 aa8.8□□□□□ -1
YBX3-218ENST00000546298 EHD1Q9H4M9 534 aa8.8□□□□□ -1
YBX3-218ENST00000546298 NT5DC2Q9H857 520 aa8.8□□□□□ -1
YBX3-218ENST00000546298 PRDM9Q9NQV7 894 aa8.8□□□□□ -1
YBX3-218ENST00000546298 DNAJC11Q9NVH1 559 aa8.8□□□□□ -1
YBX3-218ENST00000546298 WWOXQ9NZC7 414 aa8.8□□□□□ -1
YBX3-218ENST00000546298 MTO1Q9Y2Z2 717 aaKnown RBP8.8□□□□□ -1
YBX3-218ENST00000546298 MMACHCQ9Y4U1 282 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms