RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 SYTL1Q8IYJ3 562 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 SP7Q8TDD2 431 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-215ENST00000544909 SLC5A11Q8WWX8 675 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 PPCDCQ96CD2 204 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 SH3YL1Q96HL8 342 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-215ENST00000544909 TCF25Q9BQ70 676 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 PCBD2Q9H0N5 130 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 SMG9Q9H0W8 520 aaKnown RBP11.97□□□□□ -0.49
PAAF1-215ENST00000544909 RUBCNLQ9H714 662 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 TRIM39Q9HCM9 518 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 NEUROD4Q9HD90 331 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 AKIP1Q9NQ31 210 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 CCDC177Q9NQR7 707 aaPredicted RBP11.97□□□□□ -0.49
PAAF1-215ENST00000544909 FKBP14Q9NWM8 211 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 TAS2R9Q9NYW1 312 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 NDUFAF4Q9P032 175 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 BTBD3Q9Y2F9 522 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 ATP11BQ9Y2G3 1177 aa11.97□□□□□ -0.49
PAAF1-215ENST00000544909 OR2A25A4D2G3 310 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 TMEM229AB2RXF0 380 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 hCG_2039718K7EN88 272 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 M0R3G1 203 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 NRG2O14511 850 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 YY2O15391 372 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 XPNPEP2O43895 674 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 MITFO75030 526 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 B3GALT4O96024 378 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 CISD3P0C7P0 127 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 ERGP11308 486 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 CXCR2P25025 360 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 CA8P35219 290 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 KRT20P35900 424 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 UGT2B10P36537 528 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 PCBP3P57721 371 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 RPS13P62277 151 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 RPP38P78345 283 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 TAP2Q03519 686 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 PPIGQ13427 754 aaKnown RBP eCLIP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 SIM2Q14190 667 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 ELAVL3Q14576 367 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 NR1D2Q14995 579 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 SPCS2Q15005 226 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 SLC44A4Q53GD3 710 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 TUBA3EQ6PEY2 450 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 NXPE4Q6UWF7 544 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 PARS2Q7L3T8 475 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 GALNT5Q7Z7M9 940 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 FAM124AQ86V42 546 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 KRT78Q8N1N4 520 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 CELF5Q8N6W0 485 aaKnown RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 OR4C15Q8NGM1 316 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 OR2L2Q8NH16 312 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 C9orf43Q8TAL5 461 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 RAD9AQ99638 391 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 CCDC90BQ9GZT6 254 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 C1GALT1Q9NS00 363 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 GULP1Q9UBP9 304 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 ANGPT4Q9Y264 503 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 PCDHGA6Q9Y5G7 932 aa11.96□□□□□ -0.49
PAAF1-215ENST00000544909 DNMT3AQ9Y6K1 912 aaPredicted RBP11.96□□□□□ -0.49
PAAF1-215ENST00000544909 EDDM13A0A1B0GTR0 161 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SH3D21A4FU49 640 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 GPR89AB7ZAQ6 455 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 FAM20BO75063 409 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 WBP4O75554 376 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SOD1P00441 154 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ALOX5P09917 674 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 GPR89BP0CG08 455 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ARAFP10398 606 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 CSF2RAP15509 400 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ZNF8P17098 575 aaPredicted RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 IRS1P35568 1242 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 BDKRB1P46663 353 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PREPP48147 710 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 HBA1P69905 142 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 EEF1A2Q05639 463 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SLBPQ14493 270 aaKnown RBP eCLIP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 MICAQ29983 383 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 LRRC73Q5JTD7 316 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PDE12Q6L8Q7 609 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SLC15A4Q8N697 577 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RHOXF1Q8NHV9 184 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 OR8D1Q8WZ84 308 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SGCDQ92629 289 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RAB7BQ96AH8 199 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RAD51AP1Q96B01 352 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 NUS1Q96E22 293 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 TCEAL4Q96EI5 215 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 FAM210AQ96ND0 272 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 QRFPRQ96P65 431 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 DPH2Q9BQC3 489 aaPredicted RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SLC35A5Q9BS91 424 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 ITPAQ9BY32 194 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 RHBGQ9H310 441 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 NT5DC2Q9H857 520 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PELI2Q9HAT8 420 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 SH3BP4Q9P0V3 963 aa11.95□□□□□ -0.5
PAAF1-215ENST00000544909 EXO1Q9UQ84 846 aaKnown RBP11.95□□□□□ -0.5
PAAF1-215ENST00000544909 PCM1Q15154 2024 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms