RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 UNCXA6NJT0 531 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 OR7A17O14581 309 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 CCNKO75909 580 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 HACD2Q6Y1H2 254 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 OR8J3Q8NGG0 315 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 S100ZQ8WXG8 99 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ISL2Q96A47 359 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 DEPDC7Q96QD5 511 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ABCG2Q9UNQ0 655 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 DNMT3AQ9Y6K1 912 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 LRRC72A6NJI9 287 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 TARM1B6A8C7 271 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ADH5P11766 374 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 RPL34P49207 117 aaKnown RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 CLDN8P56748 225 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ST3GAL4Q11206 333 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 TEAD4Q15561 434 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 CCSMST1Q4G0I0 132 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 LCN9Q8WX39 176 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 PHPT1Q9NRX4 125 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 ELOVL2Q9NXB9 296 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 LHX3Q9UBR4 397 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 SPIN1Q9Y657 262 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 PRR23D1E9PI22 279 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 PRR23D2P0DMB1 279 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 BMP7P18075 431 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 NT5EP21589 574 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 RPL4P36578 427 aaKnown RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 RPL3P39023 403 aaKnown RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 CRTC2Q53ET0 693 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 KIAA1614Q5VZ46 1190 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ZDHHC20Q5W0Z9 365 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 TMEM126BQ8IUX1 230 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 CCDC116Q8IYX3 515 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 C7orf61Q8IZ16 206 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 NLGN4XQ8N0W4 816 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 BCL7CQ8WUZ0 217 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 RPL3LQ92901 407 aaKnown RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 SLCO4A1Q96BD0 722 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 ALPK1Q96QP1 1244 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 KLF16Q9BXK1 252 aaPredicted RBP15.53■□□□□ 0.08
VARS2-212ENST00000542001 FZD3Q9NPG1 666 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 GPR83Q9NYM4 423 aa15.53■□□□□ 0.08
VARS2-212ENST00000542001 SOCS5O75159 536 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 SMIM18P0DKX4 95 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 BMXP51813 675 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 DPY19L1Q2PZI1 675 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 CNKSR3Q6P9H4 555 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 DNASE1L2Q92874 299 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 KCNN1Q92952 543 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 VMP1Q96GC9 406 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 C14orf119Q9NWQ9 140 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 ENOPH1Q9UHY7 261 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 GSTK1Q9Y2Q3 226 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 OR1A2Q9Y585 309 aa15.52■□□□□ 0.08
VARS2-212ENST00000542001 DNTTP04053 509 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 EXOC3L2Q2M3D2 409 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 TYSND1Q2T9J0 566 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 ZNF829Q3KNS6 432 aaPredicted RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 C5orf22Q49AR2 442 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 SBSNQ6UWP8 590 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 CADM2Q8N3J6 435 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 ZNF740Q8NDX6 193 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 OR4E2Q8NGC2 313 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 ZNF671Q8TAW3 534 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 MAELQ96JY0 434 aaKnown RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 ZNF583Q96ND8 569 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 NPLQ9BXD5 320 aaPredicted RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 SERHL2Q9H4I8 314 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 SERHLQ9NQF3 203 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 MS4A12Q9NXJ0 267 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 TRPS1Q9UHF7 1281 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 OR10H1Q9Y4A9 318 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 CSF2P04141 144 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 IDSP22304 550 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 TXNL4AP83876 142 aaKnown RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 LRRC32Q14392 662 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 GPR68Q15743 365 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 IQCCQ4KMZ1 466 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 RPS26P11Q5JNZ5 115 aaPredicted RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 PRR23CQ6ZRP0 262 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 GALNT13Q8IUC8 556 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 ZNF557Q8N988 423 aaPredicted RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 TSPEARQ8WU66 669 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 FAM129BQ96TA1 746 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 CARS2Q9HA77 564 aaKnown RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 PTBP2Q9UKA9 531 aaKnown RBP15.52■□□□□ 0.07
VARS2-212ENST00000542001 ERVW-1Q9UQF0 538 aa15.52■□□□□ 0.07
VARS2-212ENST00000542001 GVINP1Q7Z2Y8 2422 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 A0A096LPI6 279 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 AMD1P17707 334 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 C21orf33P30042 268 aaPredicted RBP15.51■□□□□ 0.07
VARS2-212ENST00000542001 ACTR1BP42025 376 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 RXRGP48443 463 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 ACTR1AP61163 376 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 CREMQ03060 361 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 IL18R1Q13478 541 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SLC35F1Q5T1Q4 408 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 FAM46CQ5VWP2 391 aa15.51■□□□□ 0.07
VARS2-212ENST00000542001 SLC5A8Q8N695 610 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms