RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 HBA1P69905 142 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 RAE1P78406 368 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ACSM2AQ08AH3 577 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 MTA1Q13330 715 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 NAE1Q13564 534 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 DOC2AQ14183 400 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 TBCEQ15813 527 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ZNF181Q2M3W8 571 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 RPS26P11Q5JNZ5 115 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ACSM2BQ68CK6 577 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 PNCKQ6P2M8 343 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 MACC1Q6ZN28 852 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 NLRP8Q86W28 1048 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 DBF4BQ8NFT6 615 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 UBTD2Q8WUN7 234 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 TRNT1Q96Q11 434 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 FAM129BQ96TA1 746 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 PKP4Q99569 1192 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 SLC29A3Q9BZD2 475 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 SNTG1Q9NSN8 517 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ASIC5Q9NY37 505 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 EXO1Q9UQ84 846 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 OR51B4Q9Y5P0 310 aa9.96□□□□□ -0.81
CDC42SE1-207ENST00000540998 ANKRD34BA5PLL1 514 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR6C75A6NL08 312 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PDZK1P1A8MUH7 402 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZW10O43264 779 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 C6orf47O95873 294 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ANXA4P09525 319 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 CLEC2LP0C7M8 214 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 TNFSF8P32971 234 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 RPS19P39019 145 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PTSQ03393 145 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRKCZQ05513 592 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 EEF1AKMT2Q5JPI9 291 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 SPANXN2Q5MJ10 180 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRAF7Q6Q0C0 670 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 C2orf69Q8N8R5 385 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 IPCEF1Q8WWN9 437 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ALG14Q96F25 216 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 OTUB1Q96FW1 271 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 FYTTD1Q96QD9 318 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR4K3Q96R72 315 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 MGLLQ99685 303 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 WFDC6Q9BQY6 131 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 RSPO3Q9BXY4 272 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 MTG2Q9H4K7 406 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 YARS2Q9Y2Z4 477 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PCDHB11Q9Y5F2 797 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 TPST2O60704 377 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 AOC2O75106 756 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 HIST1H2AGP0C0S8 130 aaPredicted RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 HIST1H2ADP20671 130 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PRPS1L1P21108 318 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 RPS3P23396 243 aaKnown RBP eCLIP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 CNR2P34972 360 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 OPRD1P41143 372 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 MTAPQ13126 283 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 PTGES3Q15185 160 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 SNAP47Q5SQN1 464 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 THOC7Q6I9Y2 204 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 TMIGD1Q6UXZ0 262 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 GPR155Q7Z3F1 870 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 OR6F1Q8NGZ6 308 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ADAMTS19Q8TE59 1207 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 HIST1H2AHQ96KK5 128 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 CEP19Q96LK0 163 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 CDK5RAP1Q96SZ6 601 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 HIST1H2AJQ99878 128 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 H2AFJQ9BTM1 129 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 HTATIP2Q9BUP3 242 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 GABARAPL3Q9BY60 117 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ZDHHC6Q9H6R6 413 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 DNAJC11Q9NVH1 559 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 KCTD5Q9NXV2 234 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 VPS29Q9UBQ0 182 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 RAB23Q9ULC3 237 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ERVW-1Q9UQF0 538 aa9.96□□□□□ -0.82
CDC42SE1-207ENST00000540998 ALPK3Q96L96 1907 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRBV5-4A0A0C4DH59 114 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TBKBP1A7MCY6 615 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TAF4O00268 1085 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 HOXC11O43248 304 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 C1SP09871 688 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SRCP12931 536 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 SLC6A12P48065 614 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CAV3P56539 151 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MRPS15P82914 257 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CYP4F8P98187 520 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 HOXC5Q00444 222 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 MPPE1Q53F39 396 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 CPTPQ5TA50 214 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 TRIM48Q8IWZ4 208 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 IQCF1Q8N6M8 205 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 AQP11Q8NBQ7 271 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 ASB11Q8WXH4 323 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 VOPP1Q96AW1 172 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 DOHHQ9BU89 302 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 VN1R3Q9BXE9 311 aa9.95□□□□□ -0.82
CDC42SE1-207ENST00000540998 HSPE1-MOB4S4R3N1 261 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms