RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 MRPL45Q9BRJ2 306 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MARVELD1Q9BSK0 173 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 TRMOQ9BU70 441 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ASPNQ9BXN1 380 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 GPR63Q9BZJ6 419 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 HCSTQ9UBK5 93 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 POLG2Q9UHN1 485 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ABCG2Q9UNQ0 655 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MAB21L2Q9Y586 359 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM240BA0A1B0GVZ2 78 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MUSKO15146 869 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MED7O43513 233 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ECDO95905 644 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 LINC00032P0C843 101 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 JUPP14923 745 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 HOXA9P31269 272 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 PNPLA4P41247 253 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FOXA1P55317 472 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CSNK2BP67870 215 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SH3BP2P78314 561 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 PUDPQ08623 228 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 LGALSLQ3ZCW2 172 aaPredicted RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 NCBP2-AS2Q69YL0 99 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ALG1LQ6GMV1 187 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 SHQ1Q6PI26 577 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 RASSF6Q6ZTQ3 369 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 FAM92BQ6ZTR7 304 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ADGRD2Q7Z7M1 963 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ENTHD1Q8IYW4 607 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF567Q8N184 647 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 OR5T2Q8NGG2 359 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 OR8D4Q8NGM9 314 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CNPPD1Q9BV87 410 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CD244Q9BZW8 370 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 TUBB1Q9H4B7 451 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 GSN-AS1Q9NRJ2 163 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 CTSFQ9UBX1 484 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 PLCL2Q9UPR0 1127 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 ZFR2Q9UPR6 939 aaKnown RBP9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 MGAT4BQ9UQ53 548 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 NME7Q9Y5B8 376 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 TTC3P53804 2025 aa9.14□□□□□ -0.95
CTNNA1-243ENST00000540387 A0A087X1B8 175 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 LGALS8O00214 317 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 MDM4O15151 490 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 HCRTO43612 131 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CHP2O43745 196 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CILPO75339 1184 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 RHOBTB1O94844 696 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CBX7O95931 251 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF3P17036 446 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TPH1P17752 444 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 MAN2A2P49641 1150 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 POLR2JP52435 117 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 DEFB103AP81534 67 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CSTF1Q05048 431 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CTBP1Q13363 440 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CDH18Q13634 790 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TIMM50Q3ZCQ8 353 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CPZQ66K79 652 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 NAPEPLDQ6IQ20 393 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CD300LGQ6UXG3 332 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 DLEU7Q6UYE1 221 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 CEP68Q76N32 757 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ATCAYQ86WG3 371 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 DENND6AQ8IWF6 608 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 GPR152Q8TDT2 470 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 GGHQ92820 318 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ZBED6CLQ96FA7 236 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF583Q96ND8 569 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 DPYSL5Q9BPU6 564 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ABCB9Q9NP78 766 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 KIF25Q9UIL4 384 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 SPATA2Q9UM82 520 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 NDRG2Q9UN36 371 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TIMM13Q9Y5L4 95 aaPredicted RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ABHD14A-ACY1A0A1B0GW23 586 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 GNB5O14775 395 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 SIGLEC6O43699 453 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 SLC22A3O75751 556 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 STSP08842 583 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 LMO2P25791 158 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ADRA1BP35368 520 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 RAB13P51153 203 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 RORCP51449 518 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 SMSP52788 366 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 HERVK_113P63132 956 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 HSF2Q03933 536 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TSTQ16762 297 aaKnown RBP9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 ZNF284Q2VY69 593 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 SV2CQ496J9 727 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 GTDC1Q4AE62 458 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 TIGD5Q53EQ6 642 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 KIAA1614Q5VZ46 1190 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 FCRLBQ6BAA4 426 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 OR6B2Q6IFH4 312 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 MZT2BQ6NZ67 158 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 BHLHB9Q6PI77 547 aa9.13□□□□□ -0.95
CTNNA1-243ENST00000540387 C19orf48Q6RUI8 117 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms