RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 CLCA4Q14CN2 919 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 DGUOKQ16854 277 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 LDLRAP1Q5SW96 308 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 CPTPQ5TA50 214 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 AGTRAPQ6RW13 159 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 CCDC80Q76M96 950 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 PRSS48Q7RTY5 328 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 SLCO6A1Q86UG4 719 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 TRAM1L1Q8N609 369 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 TMCO5AQ8N6Q1 288 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 NAT16Q8N8M0 369 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 CHST14Q8NCH0 376 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF540Q8NDQ6 660 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 C7orf34Q96L11 122 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 MTERF1Q99551 399 aaKnown RBP14□□□□□ -0.17
CDCA3-207ENST00000538862 AKIP1Q9NQ31 210 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 ASAH2Q9NR71 780 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 THUMPD1Q9NXG2 353 aaKnown RBP14□□□□□ -0.17
CDCA3-207ENST00000538862 KIF17Q9P2E2 1029 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 SLCO3A1Q9UIG8 710 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 FZD4Q9ULV1 537 aa14□□□□□ -0.17
CDCA3-207ENST00000538862 C1orf226A1L170 272 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 TMEM221A6NGB7 291 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 GABRR3A8MPY1 467 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 ARHGEF33A8MVX0 844 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 E7EQ34 232 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 M0R296 226 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 KPNA4O00629 521 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-207ENST00000538862 YY2O15391 372 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 MTX2O75431 263 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 DIRAS1O95057 198 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PDGFBP01127 241 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-207ENST00000538862 FUCA1P04066 466 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PORP16435 677 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-207ENST00000538862 GRK3P35626 688 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 MAPK9P45984 424 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 SERPINB10P48595 397 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 BCAP31P51572 246 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 SIGLEC14Q08ET2 396 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 NPRL3Q12980 569 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 TDGQ13569 410 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 HTR4Q13639 388 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 ADPRMQ3LIE5 342 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 LAIR1Q6GTX8 287 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 P2RY8Q86VZ1 359 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 ATG16L2Q8NAA4 619 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 LSM14AQ8ND56 463 aaKnown RBP13.99□□□□□ -0.17
CDCA3-207ENST00000538862 SH3KBP1Q96B97 665 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 COQ8BQ96D53 544 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF300Q96RE9 604 aaPredicted RBP13.99□□□□□ -0.17
CDCA3-207ENST00000538862 KXD1Q9BQD3 176 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PCDH12Q9NPG4 1184 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 ADPRHL2Q9NX46 363 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 BTBD3Q9Y2F9 522 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PADI2Q9Y2J8 665 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PCDHGB3Q9Y5G1 929 aa13.99□□□□□ -0.17
CDCA3-207ENST00000538862 PLXNA2O75051 1894 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 A0A1W2PRU2 124 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 KRT87PA6NCN2 255 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SUV39H1O43463 412 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 FAM20BO75063 409 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MOSPD3O75425 235 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MT-ND2P03891 347 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 PABPC1P11940 636 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 IDUAP35475 653 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MAP2K4P45985 399 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MASP1P48740 699 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 PSMD7P51665 324 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 RPP38P78345 283 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 RAE1P78406 368 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 KCNJ10P78508 379 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 NAE1Q13564 534 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ATP1A4Q13733 1029 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 DMC1Q14565 340 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 RGNQ15493 299 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 TEAD4Q15561 434 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SPIN4Q56A73 249 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 LRRC73Q5JTD7 316 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ASTLQ6HA08 431 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 Q6ZVU0 165 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 HSD11B1LQ7Z5J1 315 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SLC44A3Q8N4M1 653 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF557Q8N988 423 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZFP90Q8TF47 636 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 CHTF18Q8WVB6 975 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SCAMP4Q969E2 229 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 HRASLS5Q96KN8 279 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZSWIM3Q96MP5 696 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SIGLEC11Q96RL6 698 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 DPH2Q9BQC3 489 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZSCAN5AQ9BUG6 496 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SLC46A2Q9BY10 475 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 SGK2Q9HBY8 427 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ACOT13Q9NPJ3 140 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 FBXO8Q9NRD0 319 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 STOX2Q9P2F5 926 aaPredicted RBP13.98□□□□□ -0.17
CDCA3-207ENST00000538862 ZNF318Q5VUA4 2279 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 MYOFQ9NZM1 2061 aa13.98□□□□□ -0.17
CDCA3-207ENST00000538862 PRR33A8MZF0 331 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms