RNA–Protein interactions for RNA: ENST00000538548.5

SFSWAP-207, Transcript of splicing factor SWAP, humanhuman

TSL 5

Gene SFSWAP, Length 2,636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-207ENST00000538548 PLET1Q6UQ28 207 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 CERS6Q6ZMG9 384 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 NLRP8Q86W28 1048 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 APIPQ96GX9 242 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 TEKT2Q9UIF3 430 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 OGDHLQ9ULD0 1010 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 LSM2Q9Y333 95 aaKnown RBP17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 PCDHGC4Q9Y5F7 938 aa17.9■□□□□ 0.46
SFSWAP-207ENST00000538548 FADS2P1A8MWK0 482 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 PLA2G10O15496 165 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 SLC10A3P09131 477 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 NUDT7P0C024 238 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CYP2A6P11509 494 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF7P17097 686 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 POLR2CP19387 275 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 AQP1P29972 269 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CDH12P55289 794 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 SELENOWP63302 87 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 SPIBQ01892 262 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 EXOC3L2Q2M3D2 409 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 PRAMEF19Q5SWL8 479 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 ZNF648Q5T619 568 aaPredicted RBP17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CD300LGQ6UXG3 332 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CSGALNACT1Q8TDX6 532 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 ABCG8Q9H221 673 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CHST8Q9H2A9 424 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 FBXO44Q9H4M3 255 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 C12orf10Q9HB07 376 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 RDH14Q9HBH5 336 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 FAM120CQ9NX05 1096 aaKnown RBP17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 ENOPH1Q9UHY7 261 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 PCDHB11Q9Y5F2 797 aa17.89■□□□□ 0.46
SFSWAP-207ENST00000538548 CHD5Q8TDI0 1954 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 GREB1Q4ZG55 1949 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 HYKKA2RU49 373 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 NPIPB8E9PQR5 432 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 CPSF4O95639 269 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 LGI1O95970 557 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 ZNF30P17039 623 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 RPS3P23396 243 aaKnown RBP eCLIP17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 TGM4P49221 684 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 ARHGEF7Q14155 803 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 PTGES3Q15185 160 aaKnown RBP17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 UGT8Q16880 541 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 SDHAF4Q5VUM1 108 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 NADSYN1Q6IA69 706 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 CAMKK1Q8N5S9 505 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 OR7D4Q8NG98 312 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 LKAAEAR1Q8TD35 194 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC25A46Q96AG3 418 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 KIAA1143Q96AT1 154 aaPredicted RBP17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 DIRAS2Q96HU8 199 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 MSLNLQ96KJ4 702 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 MCOLN1Q9GZU1 580 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 MAGEH1Q9H213 219 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 ING3Q9NXR8 418 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 FZD4Q9ULV1 537 aa17.89■□□□□ 0.45
SFSWAP-207ENST00000538548 TEX51A0A1B0GUA7 166 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 LEUTXA8MZ59 168 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 AKR7A2O43488 359 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 NBNO60934 754 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 HMBSP08397 361 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 EPORP19235 508 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 UQCRC1P31930 480 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 BOP1Q14137 746 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 NOXRED1Q6NXP6 359 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 PTCHD4Q6ZW05 846 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 GLRX5Q86SX6 157 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 CREB3L4Q8TEY5 395 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 TRMT61AQ96FX7 289 aaKnown RBP17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 MAPKAP1Q9BPZ7 522 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 MIXL1Q9H2W2 232 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 ABHD16BQ9H3Z7 469 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 NARFLQ9H6Q4 476 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 B3GNT2Q9NY97 397 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 CDK2AP1O14519 115 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 PRMT3O60678 531 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 FHP07954 510 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 AMD1P17707 334 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 CBLP22681 906 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 PCGF2P35227 344 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 PTPRRQ15256 657 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.88■□□□□ 0.452e-6■■■■□ 20.7
SFSWAP-207ENST00000538548 GGTA1PQ4G0N0 100 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 MBOAT1Q6ZNC8 495 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC51BQ86UW2 128 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 CLECL1Q8IZS7 167 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 C2orf69Q8N8R5 385 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 NLGN4YQ8NFZ3 816 aaPredicted RBP17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 OR8J2Q8NGG1 315 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 NDUFB11Q9NX14 153 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 MARCH2Q9P0N8 246 aa17.88■□□□□ 0.45
SFSWAP-207ENST00000538548 MEN1O00255 615 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 PROM1O43490 865 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 SLC25A14O95258 325 aaPredicted RBP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 IGHA2P01877 340 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 TSPAN19P0C672 248 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 ACADMP11310 421 aa17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 CSTF2P33240 577 aaKnown RBP eCLIP17.87■□□□□ 0.45
SFSWAP-207ENST00000538548 GPC1P35052 558 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms