RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 OR5B12Q96R08 314 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MTERF1Q99551 399 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 OCEL1Q9H607 264 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 OR6C2Q9NZP2 312 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CEPT1Q9Y6K0 416 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TRAPPC13A5PLN9 417 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RHPN2P1A8MT19 583 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 H7C417 338 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SLITRK3O94933 977 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 LATS1O95835 1130 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 HLA-DPB1P04440 258 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CETPP11597 493 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 BAG6P46379 1132 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ODF4Q2M2E3 257 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FBXO16Q8IX29 292 aaPredicted RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PAQR8Q8TEZ7 354 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ABCG4Q9H172 646 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ATG5Q9H1Y0 275 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NIT2Q9NQR4 276 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 GPATCH2Q9NW75 528 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NARFQ9UHQ1 456 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MST1RQ04912 1400 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NEMP2A6NFY4 417 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 KLF11O14901 512 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 FUCA1P04066 466 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 C7P10643 843 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 MC4RP32245 332 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 BRCC3P46736 316 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NDST2P52849 883 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ESCO2Q56NI9 601 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CPNE9Q8IYJ1 553 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 GPR151Q8TDV0 419 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PYURFQ96I23 114 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 AARSD1Q9BTE6 412 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 RNF121Q9H920 327 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 DLGAP4Q9Y2H0 992 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 SNAPINO95295 136 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 BDKRB2P30411 391 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 GAD2Q05329 585 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 XKR4Q5GH76 650 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 NOL9Q5SY16 702 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ENPP6Q6UWR7 440 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 Q6ZNX1 250 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ARHGAP12Q8IWW6 846 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 CCDC32Q9BV29 185 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TTTY10Q9BZA0 68 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ABCG5Q9H222 651 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 ZDHHC6Q9H6R6 413 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 PXMP2Q9NR77 195 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 B3GNT3Q9Y2A9 372 aa5.5□□□□□ -1.53
CSMD1-215ENST00000537824 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 VILLO15195 856 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PAGE1O75459 146 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NDST3O95803 873 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 EIPR1Q53HC9 387 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FAM117BQ6P1L5 589 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 NT5DC4Q86YG4 428 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 JAGN1Q8N5M9 183 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ZFP41Q8N8Y5 198 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GATA6Q92908 595 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 OSMRQ99650 979 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLAMF7Q9NQ25 335 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PNO1Q9NRX1 252 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MAN2C1Q9NTJ4 1040 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MRPS23Q9Y3D9 190 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1W2PP18 115 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 YDJCA8MPS7 323 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 H3BUI4 141 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CLIC1O00299 241 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SCAMP3O14828 347 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 DCNP07585 359 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 RPL10P27635 214 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GPR139Q6DWJ6 353 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 C1orf94Q6P1W5 598 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CACUL1Q86Y37 369 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC44A3Q8N4M1 653 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 JOSD2Q8TAC2 188 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SLC6A7Q99884 636 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ACTR6Q9GZN1 396 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 FAM118AQ9NWS6 357 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 PCDHB7Q9Y5E2 793 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TIMM13Q9Y5L4 95 aaPredicted RBP5.49□□□□□ -1.53
CSMD1-215ENST00000537824 CPQQ9Y646 472 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 ERCC6L2Q5T890 1561 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TRAV20A0A0B4J274 112 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 VIPP01282 170 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 STSP08842 583 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 MMP10P09238 476 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GDF10P55107 478 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 GSTM4Q03013 218 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 KCNJ11Q14654 390 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TATDN3Q17R31 274 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 POMZP3Q6PJE2 187 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 SULT4A1Q9BR01 284 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 A0A0G2JMP0 313 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1W2PPK0 400 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 A0A1W2PPL8 197 aa5.49□□□□□ -1.53
CSMD1-215ENST00000537824 TRBC2A0A5B9 178 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms