RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 GCGRP47871 477 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 GABREP78334 506 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 CSTF3Q12996 717 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 CUL3Q13618 768 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 NDUFA9Q16795 377 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 MUM1Q2TAK8 710 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 TMEM35AQ53FP2 167 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 FAM47EQ6ZV65 393 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 ARHGEF39Q8N4T4 335 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 TWIST2Q8WVJ9 160 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 PMEPA1Q969W9 287 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 MS4A6EQ96DS6 147 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SLC46A1Q96NT5 459 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 HBEGFQ99075 208 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 CCT7Q99832 543 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SLC7A5P2Q9GIP4 190 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 AICDAQ9GZX7 198 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 CUTCQ9NTM9 273 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 VTI1BQ9UEU0 232 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SLC22A7Q9Y694 548 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 PTPRBP23467 1997 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 KMT2BQ9UMN6 2715 aaPredicted RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 MDC1Q14676 2089 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 C9orf172C9J069 976 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SLC28A1O00337 649 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 EDF1O60869 148 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 ETHE1O95571 254 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 NTRK1P04629 796 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 LINC00032P0C843 101 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SMIM10L1P0DMW3 83 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 ALAS2P22557 587 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 RBMS1P29558 406 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 FAM53BQ14153 422 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 TTLL10Q6ZVT0 673 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 ABHD13Q7L211 337 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 DDIASQ8IXT1 998 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SRFBP1Q8NEF9 429 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 OR2L5Q8NG80 312 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 UTP15Q8TED0 518 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 SMIM10Q96HG1 83 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 CENPKQ9BS16 269 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SCNM1Q9BWG6 230 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 ACTR5Q9H9F9 607 aaPredicted RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 VPS29Q9UBQ0 182 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 MARCOQ9UEW3 520 aaPredicted RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 KLK13Q9UKR3 277 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SLC12A4Q9UP95 1085 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 SRPK3Q9UPE1 567 aa14.82□□□□□ -0.04
CNN1-202ENST00000535659 MRPS2Q9Y399 296 aaKnown RBP14.82□□□□□ -0.04
CNN1-202ENST00000535659 KIF26BQ2KJY2 2108 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 TPRP12270 2363 aaKnown RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 TRABD2BA6NFA1 517 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 SAP18O00422 153 aaKnown RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 PIP5K1BO14986 540 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 HDAC3O15379 428 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 NVLO15381 856 aaKnown RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 MED26O95402 600 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 VIMP08670 466 aaKnown RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 ZNF888P0CJ79 500 aaPredicted RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 ALOX12P18054 663 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 HK2P52789 917 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 ARFIP1P53367 373 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 RAB8AP61006 207 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 BTKQ06187 659 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 TGM3Q08188 693 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 COL9A2Q14055 689 aaPredicted RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 RTP5Q14D33 572 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 HERC3Q15034 1050 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 IMPG1Q17R60 797 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 RHBDD2Q6NTF9 364 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 ABHD17CQ6PCB6 329 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 IGF2-ASQ6U949 168 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 Q6ZSR9 355 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 WDR75Q8IWA0 830 aaKnown RBP14.81□□□□□ -0.04
CNN1-202ENST00000535659 SLC38A9Q8NBW4 561 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 GAL3ST3Q96A11 431 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 RGMAQ96B86 450 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 CLIP3Q96DZ5 547 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 C10orf90Q96M02 699 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 ACPTQ9BZG2 426 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 PRDM7Q9NQW5 492 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 AHSPQ9NZD4 102 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 CCL27Q9Y4X3 112 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 PTGDR2Q9Y5Y4 395 aa14.81□□□□□ -0.04
CNN1-202ENST00000535659 ERI3O43414 337 aaKnown RBP14.8□□□□□ -0.04
CNN1-202ENST00000535659 RGS14O43566 566 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 SKAP2O75563 359 aaPredicted RBP14.8□□□□□ -0.04
CNN1-202ENST00000535659 KIAA0754O94854 1291 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 SEMA3DO95025 777 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 ZNF28P17035 718 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 SPINK2P20155 84 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 PLA2G16P53816 162 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 SNRPNP63162 240 aaKnown RBP14.8□□□□□ -0.04
CNN1-202ENST00000535659 HMGCS1Q01581 520 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 PDCD2Q16342 344 aaPredicted RBP14.8□□□□□ -0.04
CNN1-202ENST00000535659 TRIM40Q6P9F5 258 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 UBE3DQ7Z6J8 389 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 ZCCHC10Q8TBK6 192 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 RNF31Q96EP0 1072 aa14.8□□□□□ -0.04
CNN1-202ENST00000535659 KCNC2Q96PR1 638 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms