RNA–Protein interactions for RNA: ENST00000534553.5

BEST1-208, Transcript of bestrophin 1, humanhuman

TSL 2 BASIC

Gene BEST1, Length 1,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-208ENST00000534553 RASAL1O95294 804 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 CPSF4O95639 269 aaKnown RBP12.82□□□□□ -0.36
BEST1-208ENST00000534553 DDCP20711 480 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 TSFMP43897 325 aaKnown RBP12.82□□□□□ -0.36
BEST1-208ENST00000534553 RGS19P49795 217 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 MAPK12P53778 367 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 CLDN2P57739 230 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 TAS2R50P59544 299 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 FADDQ13158 208 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 BIRC2Q13490 618 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SMAD2Q15796 467 aaKnown RBP12.82□□□□□ -0.36
BEST1-208ENST00000534553 NRF1Q16656 503 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 VMACQ2NL98 169 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 ABI3BPQ7Z7G0 1075 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 ST13P4Q8IZP2 240 aaPredicted RBP12.82□□□□□ -0.36
BEST1-208ENST00000534553 ANKRD53Q8N9V6 530 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 LMNTD1Q8N9Z9 388 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SRFBP1Q8NEF9 429 aaKnown RBP12.82□□□□□ -0.36
BEST1-208ENST00000534553 OR4A15Q8NGL6 344 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 ZFP90Q8TF47 636 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 HMGB4Q8WW32 186 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SLC47A1Q96FL8 570 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SPASTQ9UBP0 616 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SNX7Q9UNH6 387 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 BTBD3Q9Y2F9 522 aa12.82□□□□□ -0.36
BEST1-208ENST00000534553 SHISA7A6NL88 538 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 NDUFS4O43181 175 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 OR1F1O43749 312 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 PRICKLE3O43900 615 aaPredicted RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 ZNF217O75362 1048 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SH3BGRLO75368 114 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 TNFAIP8O95379 198 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 PSMB5P28074 263 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 TPP2P29144 1249 aaPredicted RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 BSGP35613 385 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SRP54P61011 504 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 TXNL4AP83876 142 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 ILF3Q12906 894 aaKnown RBP eCLIP12.81□□□□□ -0.36
BEST1-208ENST00000534553 SF1Q15637 639 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 KIAA0895LQ68EN5 471 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ADCK2Q7Z695 626 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 AMIGO1Q86WK6 493 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 CLECL1Q8IZS7 167 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 OR2L3Q8NG85 312 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 WDR48Q8TAF3 677 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SDCCAG3Q96C92 435 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 DNAJB9Q9UBS3 223 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 OAZ3Q9UMX2 235 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 EXO1Q9UQ84 846 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 MRPS17Q9Y2R5 130 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 PLEKHM1Q9Y4G2 1056 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SAP18O00422 153 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 NARSO43776 548 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 GUCY1B2O75343 617 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SMNDC1O75940 238 aaKnown RBP eCLIP12.81□□□□□ -0.36
BEST1-208ENST00000534553 KCNK5O95279 499 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 FKBP9O95302 570 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 KRT75O95678 551 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ASGR2P07307 311 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 IL3P08700 152 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 F3P13726 295 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 CKMT2P17540 419 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ACTR1BP42025 376 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ACTR1AP61163 376 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 VAC14Q08AM6 782 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 RBBP4Q09028 425 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 MYBPC3Q14896 1274 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 UGT2A3Q6UWM9 527 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ADHFE1Q8IWW8 467 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 SVOPLQ8N434 492 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 CBR4Q8N4T8 237 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 LCN9Q8WX39 176 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 PYURFQ96I23 114 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 RDH12Q96NR8 316 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 OSBPL10Q9BXB5 764 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 ANKRD60Q9BZ19 345 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 DDX31Q9H8H2 851 aaKnown RBP12.81□□□□□ -0.36
BEST1-208ENST00000534553 NEUROD4Q9HD90 331 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 CD320Q9NPF0 282 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 TAS2R9Q9NYW1 312 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 DLGAP2Q9P1A6 1054 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 TBC1D29Q9UFV1 150 aa12.81□□□□□ -0.36
BEST1-208ENST00000534553 FAM221BA6H8Z2 402 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 A6NHS1 94 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 SAC3D1A6NKF1 404 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 OR5K4A6NMS3 321 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 SOCS2O14508 198 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 TBX6O95947 436 aaPredicted RBP12.8□□□□□ -0.36
BEST1-208ENST00000534553 HPRP00739 348 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 SERPINA1P01009 418 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 TNFP01375 233 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 UBTFL6P0CB48 400 aaPredicted RBP12.8□□□□□ -0.36
BEST1-208ENST00000534553 SOX11P35716 441 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 RXRGP48443 463 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 EPS8Q12929 822 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 ELOAQ14241 798 aaKnown RBP12.8□□□□□ -0.36
BEST1-208ENST00000534553 KIR2DS3Q14952 304 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.8□□□□□ -0.36
BEST1-208ENST00000534553 ANKRD26P1Q6NSI1 321 aa12.8□□□□□ -0.36
BEST1-208ENST00000534553 ZCCHC8Q6NZY4 707 aaKnown RBP12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms