RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 MATN4O95460 622 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SRCP12931 536 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 FMO3P31513 532 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 RBM48Q5RL73 367 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SLC8B1Q6J4K2 584 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 CRTC1Q6UUV9 634 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 OR8J3Q8NGG0 315 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 OR10Q1Q8NGQ4 319 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 BTBD1Q9H0C5 482 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 CTPS2Q9NRF8 586 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 PCTPQ9UKL6 214 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 PCDHB11Q9Y5F2 797 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 LDB2O43679 373 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 RYKP34925 604 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 EIF5AP63241 154 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 ELAVL3Q14576 367 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 OCLNQ16625 522 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 MSANTD1Q6ZTZ1 278 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 SGIP1Q9BQI5 828 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 YTHDF1Q9BYJ9 559 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 POLR2J3Q9H1A7 115 aaKnown RBP16.65■□□□□ 0.26
PHRF1-206ENST00000534320 IL17CQ9P0M4 197 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 UTS2RQ9UKP6 389 aa16.65■□□□□ 0.26
PHRF1-206ENST00000534320 BLOC1S3Q6QNY0 202 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 NFKBIDQ8NI38 313 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 FCRL4Q96PJ5 515 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 CNPPD1Q9BV87 410 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 KCNH6Q9H252 994 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 EIF3KQ9UBQ5 218 aaKnown RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 A0A0J9YVX5 310 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 TBX1O43435 398 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 CHST10O43529 356 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 JUNP05412 331 aaKnown RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 MEF2AQ02078 507 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 UBXN2BQ14CS0 331 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 NADK2Q4G0N4 442 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 KRTCAP2Q8N6L1 136 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 GPR151Q8TDV0 419 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 PTERQ96BW5 349 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 HSH2DQ96JZ2 352 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 SORT1Q99523 831 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 ARNT2Q9HBZ2 717 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 DLGAP4Q9Y2H0 992 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 TRBC2A0A5B9 178 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 STATHP02808 62 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 BCHEP06276 602 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 BCKDHAP12694 445 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 AZGP1P25311 298 aaKnown RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 CBFBQ13951 182 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 C10orf62Q5T681 223 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 MND1Q9BWT6 205 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 BHLHE41Q9C0J9 482 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 SFXN1Q9H9B4 322 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 EMCNQ9ULC0 261 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 ECM29Q5VYK3 1845 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 ZNF99A8MXY4 864 aaPredicted RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 EEDO75530 441 aaKnown RBP16.64■□□□□ 0.25
PHRF1-206ENST00000534320 C6orf47O95873 294 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 S100GP29377 79 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 ABHD13Q7L211 337 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 SLC15A3Q8IY34 581 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 KLHDC9Q8NEP7 349 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 TSTD1Q8NFU3 115 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 NEUROD4Q9HD90 331 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 HCSTQ9UBK5 93 aa16.64■□□□□ 0.25
PHRF1-206ENST00000534320 IFNA6P05013 189 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 EIF4HQ15056 248 aaKnown RBP16.63■□□□□ 0.25
PHRF1-206ENST00000534320 CEACAM20Q6UY09 585 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 HACD2Q6Y1H2 254 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 ZNF534Q76KX8 674 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 OR4E2Q8NGC2 313 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 KHSRPQ92945 711 aaKnown RBP eCLIP16.63■□□□□ 0.251e-7■□□□□ 11.1
PHRF1-206ENST00000534320 KXD1Q9BQD3 176 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 CLSTN3Q9BQT9 956 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 TVP23BQ9NYZ1 205 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 HEPACAM2A8MVW5 462 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 CDH15P55291 814 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 EIPR1Q53HC9 387 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 TOR1AIP1Q5JTV8 583 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 NIPAL1Q6NVV3 410 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 MINDY1Q8N5J2 469 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 IPCEF1Q8WWN9 437 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-206ENST00000534320 SMARCD2Q92925 531 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 RFKQ969G6 155 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 SLC39A13Q96H72 371 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 SLC22A4Q9H015 551 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 GPN3Q9UHW5 284 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-206ENST00000534320 ISPDA4D126 451 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 RIIAD1A6NNX1 92 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 PRMT3O60678 531 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 PENKP01210 267 aaPredicted RBP16.63■□□□□ 0.25
PHRF1-206ENST00000534320 FPR1P21462 350 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 DSC1Q08554 894 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 FAM26DQ5JW98 314 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 EOGTQ5NDL2 527 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 ADGRG6Q86SQ4 1221 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 CAMKVQ8NCB2 501 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 NT5C3BQ969T7 300 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 FRMD6Q96NE9 622 aa16.63■□□□□ 0.25
PHRF1-206ENST00000534320 CAMK1GQ96NX5 476 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms