RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 ANKS4BQ8N8V4 417 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 CAMKVQ8NCB2 501 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 CCDC197Q8NCU1 140 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 OR7G3Q8NG95 312 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 MIPOL1Q8TD10 442 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 PPP4R1Q8TF05 950 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 FGF11Q92914 225 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 NAF1Q96HR8 494 aaKnown RBP12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 GBP5Q96PP8 586 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 TRIM4Q9C037 500 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 SLC6A16Q9GZN6 736 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 CUTCQ9NTM9 273 aa12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 G3BP2Q9UN86 482 aaKnown RBP12.11□□□□□ -0.47
RPUSD4-208ENST00000533628 TXNDC9O14530 226 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 BIRC5O15392 142 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ONECUT2O95948 504 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 OTCP00480 354 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 GSTM2P28161 218 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TPP2P29144 1249 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ARRB2P32121 409 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 MXRA7P84157 204 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 LCP2Q13094 533 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 GARNL3Q5VVW2 1013 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 LCN10Q6JVE6 187 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 MILR1Q7Z6M3 343 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 MYLK4Q86YV6 388 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 DSELQ8IZU8 1212 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TTC29Q8NA56 475 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 KCT2Q8NC54 265 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 GALNT6Q8NCL4 622 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TRPV3Q8NET8 790 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 WDR20Q8TBZ3 569 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 NKD1Q969G9 470 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ATP6V1E2Q96A05 226 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SMIM10Q96HG1 83 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SLX1AQ9BQ83 275 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TNFRSF12AQ9NP84 129 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 DHCR7Q9UBM7 475 aaKnown RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SRPK3Q9UPE1 567 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 STMND1H3BQB6 276 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TAF4O00268 1085 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 DSCR3O14972 297 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 FOXS1O43638 330 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 RAD1O60671 282 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 CLEC3AO75596 197 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 OR4F21O95013 312 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 MLYCDO95822 493 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SERPINA6P08185 405 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 HBQ1P09105 142 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ARSFP54793 590 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 PPP2R2AP63151 447 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 CYP4F2P78329 520 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 RBBP7Q16576 425 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 HIST2H2ACQ16777 129 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 FAM214AQ32MH5 1076 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 ADPRMQ3LIE5 342 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 HIST2H2AA3Q6FI13 130 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 C6orf15Q6UXA7 325 aaPredicted RBP12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 AFAP1L2Q8N4X5 818 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TTLQ8NG68 377 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 UBE2E3Q969T4 207 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 NDC1Q9BTX1 674 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 KLHL31Q9H511 634 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 MLXIPLQ9NP71 852 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 SLC22A11Q9NSA0 550 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 TRPS1Q9UHF7 1281 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 FER1L5A0AVI2 2057 aa12.1□□□□□ -0.47
RPUSD4-208ENST00000533628 FRYQ5TBA9 3013 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CEP295Q9C0D2 2601 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 C4orf51C9J302 202 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 MEN1O00255 615 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 TERTO14746 1132 aaKnown RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NDUFS4O43181 175 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NPHS1O60500 1241 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CAPN1P07384 714 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 LIPCP11150 499 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NQO1P15559 274 aaKnown RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 PKNOX1P55347 436 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 TAF11Q15544 211 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 TGIF1Q15583 401 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CPSF6Q16630 551 aaKnown RBP eCLIP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 GPRIN3Q6ZVF9 776 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CPLX4Q7Z7G2 160 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NLGN4XQ8N0W4 816 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 RNF175Q8N4F7 328 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 ANKRD42Q8N9B4 389 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 NLGN4YQ8NFZ3 816 aaPredicted RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 PROKR1Q8TCW9 393 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 CNDP1Q96KN2 507 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 MMADHCQ9H3L0 296 aaPredicted RBP12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 STK38LQ9Y2H1 464 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 SSUH2Q9Y2M2 353 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 PCDHGA11Q9Y5H2 935 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 SLC22A7Q9Y694 548 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 FREM2Q5SZK8 3169 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 A0A1B0GX78 115 aa12.09□□□□□ -0.47
RPUSD4-208ENST00000533628 LRIT2A6NDA9 550 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms