RNA–Protein interactions for RNA: ENST00000533526.1

ATM-220, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 234 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-220ENST00000533526 HEXDCQ8WVB3 486 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 ZDHHC19Q8WVZ1 309 aaPredicted RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 TOMM40LQ969M1 308 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 ERP27Q96DN0 273 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 ERO1AQ96HE7 468 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 RBM41Q96IZ5 413 aaKnown RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 RADILQ96JH8 1075 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 PAPOLGQ9BWT3 736 aaKnown RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 GNB4Q9HAV0 340 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 THAP10Q9P2Z0 257 aaPredicted RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 KLK11Q9UBX7 282 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 ZNF510Q9Y2H8 683 aa2.21□□□□□ -2.06
ATM-220ENST00000533526 MRPS18CQ9Y3D5 142 aaKnown RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 TDRD15B5MCY1 1934 aaKnown RBP2.21□□□□□ -2.06
ATM-220ENST00000533526 IGHV3-38A0A0C4DH36 116 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 ACOD1A6NK06 481 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 INPP4BO15327 924 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 MAGEB2O15479 319 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TNFSF12O43508 249 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TIMM44O43615 452 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 KIF5CO60282 957 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 FCGR3BO75015 233 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TBCAO75347 108 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 SRSF10O75494 262 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 RPLP0P05388 317 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 PCP11498 1178 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 GOT1P17174 413 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 ITIH1P19827 911 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 CTNNA2P26232 953 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 SSTR1P30872 391 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 HOXC13P31276 330 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 FEN1P39748 380 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 FKBP3Q00688 224 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 CETN1Q12798 172 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 KIAA0141Q14154 515 aaPredicted RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 UPP1Q16831 310 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 SLC25A30Q5SVS4 291 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TCEAL6Q6IPX3 200 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 ZNF774Q6NX45 483 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TRMT11Q7Z4G4 463 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 METTL23Q86XA0 190 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 CATSPER3Q86XQ3 398 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 MARCH9Q86YJ5 346 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 APCDD1Q8J025 514 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 OR9Q2Q8NGE9 314 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 OR5M9Q8NGP3 310 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 SPPL2AQ8TCT8 520 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 TSSK2Q96PF2 358 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 GBP5Q96PP8 586 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 ALKBH7Q9BT30 221 aaPredicted RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 PUS3Q9BZE2 481 aaKnown RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 TRIM7Q9C029 511 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 PHPT1Q9NRX4 125 aaPredicted RBP2.2□□□□□ -2.06
ATM-220ENST00000533526 PDRG1Q9NUG6 133 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 RARRES3Q9UL19 164 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 SATB2Q9UPW6 733 aa2.2□□□□□ -2.06
ATM-220ENST00000533526 NEDD4P46934 1319 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 A0A0B4J203 849 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 IGHV3-20A0A0C4DH32 117 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 ARHGEF37A1IGU5 675 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 C5orf52A6NGY3 159 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 SHISA7A6NL88 538 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PRSS46E5RG02 174 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 G3V2L1 256 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PPIP5K2O43314 1243 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 GALR3O60755 368 aaPredicted RBP2.19□□□□□ -2.06
ATM-220ENST00000533526 MT-ND2P03891 347 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 HOXD4P09016 255 aaPredicted RBP2.19□□□□□ -2.06
ATM-220ENST00000533526 RPL9P32969 192 aaKnown RBP2.19□□□□□ -2.06
ATM-220ENST00000533526 SOAT1P35610 550 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 GP5P40197 560 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 CRKLP46109 303 aaKnown RBP2.19□□□□□ -2.06
ATM-220ENST00000533526 NPY4RP50391 375 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 RIDAP52758 137 aaKnown RBP2.19□□□□□ -2.06
ATM-220ENST00000533526 COX10Q12887 443 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PEX6Q13608 980 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PSMD6Q15008 389 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 C15orf32Q32M92 178 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 ZNF542PQ5EBM4 170 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 ZRANB3Q5FWF4 1079 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 SPANXN4Q5MJ08 99 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.19□□□□□ -2.06
ATM-220ENST00000533526 TXNRD3NBQ6F5E7 133 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 BTNL8Q6UX41 500 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 ZNF841Q6ZN19 808 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 Q6ZR54 194 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 SH2D6Q7Z4S9 175 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 SPATA19Q7Z5L4 167 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PIGWQ7Z7B1 504 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 SLC47A2Q86VL8 602 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 CROCCP3Q8IVE0 287 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 OR4N5Q8IXE1 308 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 TEX26Q8N6G2 289 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 NEDD4LQ96PU5 975 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 PCDHB18PQ96TA0 734 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 EDEM3Q9BZQ6 932 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 FAM129AQ9BZQ8 928 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 LMAN1LQ9HAT1 526 aa2.19□□□□□ -2.06
ATM-220ENST00000533526 TSPAN16Q9UKR8 245 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms