RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 CYP4F8P98187 520 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF33AQ06730 810 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SOWAHAQ2M3V2 549 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 HECTD2Q5U5R9 776 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 KIAA0907Q7Z7F0 614 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 GLCCI1Q86VQ1 547 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 FAM126BQ8IXS8 530 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SP8Q8IXZ3 490 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PTGR2Q8N8N7 351 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PPHLN1Q8NEY8 458 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CLEC4CQ8WTT0 213 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 KCNA7Q96RP8 456 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 APOL5Q9BWW9 433 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ALG9Q9H6U8 611 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 C8orf33Q9H7E9 229 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ANKRA2Q9H9E1 313 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF226Q9NYT6 803 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PRKAG2Q9UGJ0 569 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SCP2D1Q9UJQ7 156 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PCDHGA9Q9Y5G4 932 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CLCA3PQ9Y6N3 262 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TRAV19A0A0A6YYK7 116 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SYN3O14994 580 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CCNDBP1O95273 360 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PRAMEF1O95521 474 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 GAAP10253 952 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SELLP14151 372 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 HOXB8P17481 243 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PSMA1P25786 263 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 HSPA7P48741 367 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SUOXP51687 545 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF124Q15973 351 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 HFEQ30201 348 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 MANEALQ5VSG8 457 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 Q8N402 240 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CCNYQ8ND76 341 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 OR2T11Q8NH01 316 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TMEM163Q8TC26 289 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 NETO1Q8TDF5 533 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TSGA13Q96PP4 275 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 PCYT2Q99447 389 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 MND1Q9BWT6 205 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SIK2Q9H0K1 926 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 BRD7Q9NPI1 651 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 GSN-AS1Q9NRJ2 163 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 C1orf109Q9NX04 203 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ING1Q9UK53 422 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TSPAN16Q9UKR8 245 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CFAP20Q9Y6A4 193 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 DOCK4Q8N1I0 1966 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZBTB42B2RXF5 422 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 H7C2Y5 167 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 M0R233 179 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 NMBP08949 121 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 KCNJ5P48544 419 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF81P51508 661 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 CLCN7P51798 805 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 AGFG1P52594 562 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 RAG2P55895 527 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 KCTD2Q14681 263 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 C3orf38Q5JPI3 329 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 DACT2Q5SW24 774 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 B3GNTL1Q67FW5 361 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 C5orf46Q6UWT4 87 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SEZ6L2Q6UXD5 910 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 FAM92BQ6ZTR7 304 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ZNF605Q86T29 641 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ATP6V1C2Q8NEY4 427 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 LPPQ93052 612 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ERMAPQ96PL5 475 aaPredicted RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 H2AFJQ9BTM1 129 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 B3GNT5Q9BYG0 378 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 KCNH6Q9H252 994 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TFB2MQ9H5Q4 396 aaKnown RBP7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TMPRSS4Q9NRS4 437 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 SNTG1Q9NSN8 517 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 TCEAL9Q9UHQ7 104 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 POMT2Q9UKY4 750 aa7.84□□□□□ -1.15
CSDE1-214ENST00000530886 ANKRD12Q6UB98 2062 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TRABD2BA6NFA1 517 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 KLK8O60259 260 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SULT1A3P0DMM9 295 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SULT1A4P0DMN0 295 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF3P17036 446 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 HOXB9P17482 250 aaPredicted RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TPH1P17752 444 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SDC2P34741 201 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 RORAP35398 523 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 DSG2Q14126 1118 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SMAD2Q15796 467 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 MPEG1Q2M385 716 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 AP5B1Q2VPB7 878 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ZNF528Q3MIS6 628 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 TTLL9Q3SXZ7 439 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 PLAG1Q6DJT9 500 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SWSAP1Q6NVH7 229 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 ESRP1Q6NXG1 681 aaKnown RBP7.83□□□□□ -1.16
CSDE1-214ENST00000530886 CATSPERGQ6ZRH7 1159 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 SLC34A3Q8N130 599 aa7.83□□□□□ -1.16
CSDE1-214ENST00000530886 STPG2Q8N412 459 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms