RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 PYCR2Q96C36 320 aa10.39□□□□□ -0.75
NEDD8-204ENST00000526430 PGM2Q96G03 612 aa10.39□□□□□ -0.75
NEDD8-204ENST00000526430 TREX2Q9BQ50 279 aaPredicted RBP10.39□□□□□ -0.75
NEDD8-204ENST00000526430 TMBIM4Q9HC24 238 aa10.39□□□□□ -0.75
NEDD8-204ENST00000526430 ARL15Q9NXU5 204 aa10.39□□□□□ -0.75
NEDD8-204ENST00000526430 KLK4Q9Y5K2 254 aa10.39□□□□□ -0.75
NEDD8-204ENST00000526430 UQCRHLA0A096LP55 91 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 CCDC189A1A4V9 331 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 SLC9B1P1A6NJY1 282 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 C2orf74A8MZ97 194 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 G3V2L1 256 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 H3BMH7 237 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 PEX12O00623 359 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 TYROBPO43914 113 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 DLX3O60479 287 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KLF7O75840 302 aaPredicted RBP10.38□□□□□ -0.75
NEDD8-204ENST00000526430 PROCP04070 461 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 CTSBP07858 339 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 UQCRHP07919 91 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KRT15P19012 456 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KLK2P20151 261 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 OTX2P32243 289 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 HSD17B2P37059 387 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KIR3DL1P43629 444 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 ARL4DP49703 201 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KCNK10P57789 538 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 PRDX1Q06830 199 aaKnown RBP10.38□□□□□ -0.75
NEDD8-204ENST00000526430 IFFO1Q0D2I5 559 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KIR2DS3Q14952 304 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 TLR1Q15399 786 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 SLC5A12Q1EHB4 618 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 PTCHD3Q3KNS1 767 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KRT71Q3SY84 523 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 CDKL4Q5MAI5 379 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 ZNF425Q6IV72 752 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 FBXO42Q6P3S6 717 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 TAOK1Q7L7X3 1001 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 GPSM1Q86YR5 675 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 CARFQ8N187 725 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 OR2L3Q8NG85 312 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 DNAJB14Q8TBM8 379 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 ARL8AQ96BM9 186 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 MTFMTQ96DP5 389 aaKnown RBP10.38□□□□□ -0.75
NEDD8-204ENST00000526430 CABS1Q96KC9 395 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 FOXC2Q99958 501 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 SH3GL2Q99962 352 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 RAB11FIP5Q9BXF6 653 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 KLHL25Q9H0H3 589 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 ENKD1Q9H0I2 346 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 SLC6A20Q9NP91 592 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 DLL4Q9NR61 685 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 C1GALT1Q9NS00 363 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 MKS1Q9NXB0 559 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 DCDC2Q9UHG0 476 aa10.38□□□□□ -0.75
NEDD8-204ENST00000526430 VPS13CQ709C8 3753 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 TRGV8A0A0C4DH27 118 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 GSAPA4D1B5 854 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 NCF1BA6NI72 391 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 NCF1CA8MVU1 366 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ISM1B1AKI9 464 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 C9J4A7 227 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 PLIN3O60664 434 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 CTSVO60911 334 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 CLDN14O95500 239 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 GSTA1P08263 222 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ANXA5P08758 320 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 RBP1P09455 135 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 HIST1H2AGP0C0S8 130 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 NCF1P14598 390 aaPredicted RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 HIST1H2ADP20671 130 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 GRIA3P42263 894 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 TBPL1P62380 186 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 PPP2R2AP63151 447 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 AIMP2Q13155 320 aaKnown RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 E2F2Q14209 437 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 GPR19Q15760 415 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 INAQ16352 499 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 TSNAXIP1Q2TAA8 658 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 TMTC4Q5T4D3 741 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 FAM219BQ5XKK7 198 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ICE2Q659A1 982 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 SULT1C3Q6IMI6 304 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 KLHL35Q6PF15 583 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 LCA5Q86VQ0 697 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 DNAJC22Q8N4W6 341 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 UBTD2Q8WUN7 234 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 NR4A3Q92570 626 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 TLCD1Q96CP7 247 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 CLIP3Q96DZ5 547 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 HIST1H2AHQ96KK5 128 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 MDFIQ99750 246 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 HIST1H2AJQ99878 128 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 MRPL57Q9BQC6 102 aaKnown RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 H2AFJQ9BTM1 129 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ACAT2Q9BWD1 397 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 ATP13A2Q9NQ11 1180 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 P4HTMQ9NXG6 502 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 CPSF2Q9P2I0 782 aaKnown RBP10.37□□□□□ -0.75
NEDD8-204ENST00000526430 SLC17A7Q9P2U7 560 aa10.37□□□□□ -0.75
NEDD8-204ENST00000526430 XPR1Q9UBH6 696 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms