RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 MAGEA11P43364 429 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 OR3A3P47888 321 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 NR2C2P49116 596 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 CLDN17P56750 224 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 PMP22Q01453 160 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 PRKCEQ02156 737 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 SPP2Q13103 211 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 OPCMLQ14982 345 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 KRTAP27-1Q3LI81 207 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 PDLIM3Q53GG5 364 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 ARMCX4Q5H9R4 360 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 C20orf194Q5TEA3 1177 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 MACC1Q6ZN28 852 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 USP43Q70EL4 1123 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 C16orf82Q7Z2V1 217 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 TBC1D21Q8IYX1 336 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 THEM5Q8N1Q8 247 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 LRTM2Q8N967 370 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 OR4A16Q8NH70 328 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 LGALS12Q96DT0 336 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 SCRN2Q96FV2 425 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 C16orf58Q96GQ5 468 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 LMLNQ96KR4 655 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 NAP1L5Q96NT1 182 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 GUCD1Q96NT3 240 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 CDCA3Q99618 268 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 URM1Q9BTM9 101 aaKnown RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 TRMT61BQ9BVS5 477 aaKnown RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 CPVLQ9H3G5 476 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 ZBTB20Q9HC78 741 aaPredicted RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 CHST11Q9NPF2 352 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 XPO7Q9UIA9 1087 aaKnown RBP4.1□□□□□ -1.75
CSDE1-211ENST00000525970 POU2F3Q9UKI9 436 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 EXOC7Q9UPT5 735 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 NCAPD2Q15021 1401 aa4.1□□□□□ -1.75
CSDE1-211ENST00000525970 IGLV5-45A0A087WSX0 123 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 DENND3A2RUS2 1198 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ANGPT2O15123 496 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 LRP3O75074 770 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 YES1P07947 543 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 FRMD6-AS1P0C7T7 363 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 CPA3P15088 417 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 CA6P23280 308 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 FCARP24071 287 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ADSSP30520 456 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 OR1D2P34982 312 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 MAGEA4P43358 317 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 FMO5P49326 533 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ARFIP1P53367 373 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 TRA2BP62995 288 aaKnown RBP4.09□□□□□ -1.75
CSDE1-211ENST00000525970 STX1AQ16623 288 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 HSP90AA5PQ58FG0 334 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 XKR6Q5GH73 641 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 SIRPB2Q5JXA9 342 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 RAET1GQ6H3X3 334 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 UGT3A1Q6NUS8 523 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 SPSB3Q6PJ21 355 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 OLFM4Q6UX06 510 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 COX8CQ7Z4L0 72 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 PPP1R42Q7Z4L9 355 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 AMZ2Q86W34 360 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 CDK20Q8IZL9 346 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 RNF148Q8N7C7 305 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 MINDY2Q8NBR6 621 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 OR56B1Q8NGI3 324 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ZNF606Q8WXB4 792 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 SORCS1Q8WY21 1168 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ULK4Q96C45 1275 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 DTNBP1Q96EV8 351 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 VPS39Q96JC1 886 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 C4orf45Q96LM5 186 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 NECTIN4Q96NY8 510 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 TAAR6Q96RI8 345 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 CRACR2AQ9BSW2 395 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 C1QTNF4Q9BXJ3 329 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 EGLN1Q9GZT9 426 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 RAB17Q9H0T7 212 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 ATG10Q9H0Y0 220 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 SIRPDQ9H106 197 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 DPH5Q9H2P9 285 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 COQ10BQ9H8M1 238 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 CNOT2Q9NZN8 540 aaKnown RBP4.09□□□□□ -1.75
CSDE1-211ENST00000525970 OR6C2Q9NZP2 312 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 SPATA31D1Q6ZQQ2 1576 aa4.09□□□□□ -1.75
CSDE1-211ENST00000525970 IGLV9-49A0A0B4J1Y8 123 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 A0A0U1RRA0 63 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 A0A1B0GWJ7 208 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 A0A1W2PS18 150 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 CYSRT1A8MQ03 144 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 ERVV-2B6SEH9 535 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 E5RGE8 158 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 ATP6V0E1O15342 81 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 TEX28O15482 410 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 PRKNO60260 465 aaPredicted RBP4.08□□□□□ -1.76
CSDE1-211ENST00000525970 CLN5O75503 358 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 KRT33AO76009 404 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 PPP1R3DO95685 299 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 CHRNGP07510 517 aa4.08□□□□□ -1.76
CSDE1-211ENST00000525970 RBMS1P29558 406 aaKnown RBP4.08□□□□□ -1.76
CSDE1-211ENST00000525970 ALDH4A1P30038 563 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms