RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 ATG10Q9H0Y0 220 aa21.28■■□□□ 1
PVT1-218ENST00000523328 CCDC68Q9H2F9 335 aa21.28■■□□□ 1
PVT1-218ENST00000523328 ADAMTS6Q9UKP5 1117 aa21.28■■□□□ 1
PVT1-218ENST00000523328 PDE10AQ9Y233 779 aa21.28■■□□□ 1
PVT1-218ENST00000523328 ZNF469Q96JG9 3925 aaPredicted RBP21.27■■□□□ 1
PVT1-218ENST00000523328 NKX2-6A6NCS4 301 aa21.27■■□□□ 1
PVT1-218ENST00000523328 CHST10O43529 356 aa21.27■■□□□ 1
PVT1-218ENST00000523328 RFC3P40938 356 aa21.27■■□□□ 1
PVT1-218ENST00000523328 OLR1P78380 273 aa21.27■■□□□ 1
PVT1-218ENST00000523328 DHX34Q14147 1143 aaKnown RBP21.27■■□□□ 1
PVT1-218ENST00000523328 CMPK2Q5EBM0 449 aa21.27■■□□□ 1
PVT1-218ENST00000523328 AGTRAPQ6RW13 159 aa21.27■■□□□ 1
PVT1-218ENST00000523328 CAND1Q86VP6 1230 aaKnown RBP21.27■■□□□ 1
PVT1-218ENST00000523328 SULF2Q8IWU5 870 aa21.27■■□□□ 1
PVT1-218ENST00000523328 LILRB4Q8NHJ6 448 aa21.27■■□□□ 1
PVT1-218ENST00000523328 C16orf52Q8NHV5 167 aa21.27■■□□□ 1
PVT1-218ENST00000523328 ASB5Q8WWX0 329 aa21.27■■□□□ 1
PVT1-218ENST00000523328 SARGQ9BW04 601 aa21.27■■□□□ 1
PVT1-218ENST00000523328 SGPP1Q9BX95 441 aa21.27■■□□□ 1
PVT1-218ENST00000523328 UCK2Q9BZX2 261 aa21.27■■□□□ 1
PVT1-218ENST00000523328 RNF6Q9Y252 685 aa21.27■■□□□ 1
PVT1-218ENST00000523328 KLF13Q9Y2Y9 288 aaPredicted RBP21.27■■□□□ 1
PVT1-218ENST00000523328 PRRC2AP48634 2157 aaKnown RBP21.26■□□□□ 0.99
PVT1-218ENST00000523328 ZCWPW2A0A1B0GU75 182 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 FAM237BA0A1B0GVD1 139 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 SAGE2PA6NJ88 616 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 FOXO6A8MYZ6 492 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 EIF3FO00303 357 aaPredicted RBP21.26■□□□□ 0.99
PVT1-218ENST00000523328 HS6ST1O60243 411 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 B4GALT2O60909 372 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 TOXO94900 526 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 B3GALT4O96024 378 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 TFEBP19484 476 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 JAK1P23458 1154 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 MSX1P28360 303 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 CHRNB4P30926 498 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 GRK3P35626 688 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 NAE1Q13564 534 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 DEFB134Q4QY38 66 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 TMEM211Q6ICI0 200 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 CASC4Q6P4E1 433 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 LCTLQ6UWM7 567 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 QSOX2Q6ZRP7 698 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 DMRTC2Q8IXT2 367 aaPredicted RBP21.26■□□□□ 0.99
PVT1-218ENST00000523328 RPRMLQ8N4K4 120 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 NFAM1Q8NET5 270 aaPredicted RBP21.26■□□□□ 0.99
PVT1-218ENST00000523328 ZNF669Q96BR6 464 aaPredicted RBP21.26■□□□□ 0.99
PVT1-218ENST00000523328 PTCHD1Q96NR3 888 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 PLSCR2Q9NRY7 297 aa21.26■□□□□ 0.99
PVT1-218ENST00000523328 FAM90A27PA6NNH2 459 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 KLRC4-KLRK1H3BQV0 150 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 NDUFS4O43181 175 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 NPPBP16860 134 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 ALOX12P18054 663 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 SLC1A2P43004 574 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 MAGEA6P43360 314 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 TERF1P54274 439 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 BTG2P78543 158 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 MEF2AQ02078 507 aaPredicted RBP21.25■□□□□ 0.99
PVT1-218ENST00000523328 THOC5Q13769 683 aaKnown RBP21.25■□□□□ 0.99
PVT1-218ENST00000523328 CYP4X1Q8N118 509 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 ABHD11Q8NFV4 315 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 ALKBH8Q96BT7 664 aaKnown RBP21.25■□□□□ 0.99
PVT1-218ENST00000523328 TP63Q9H3D4 680 aaPredicted RBP21.25■□□□□ 0.99
PVT1-218ENST00000523328 SAMD15Q9P1V8 674 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 ZKSCAN5Q9Y2L8 839 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 COMMD10Q9Y6G5 202 aa21.25■□□□□ 0.99
PVT1-218ENST00000523328 AKAP6Q13023 2319 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 IGKV3D-11A0A0A0MRZ8 115 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 FCHO1O14526 889 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 PEX1O43933 1283 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 CDC40O60508 579 aaKnown RBP eCLIP21.24■□□□□ 0.99
PVT1-218ENST00000523328 PRMT3O60678 531 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 CCND1P24385 295 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 PWP1Q13610 501 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 EMC4Q5J8M3 183 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 ANKRD22Q5VYY1 191 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 ZFP62Q8NB50 900 aaPredicted RBP21.24■□□□□ 0.99
PVT1-218ENST00000523328 OR4K1Q8NGD4 311 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 RND1Q92730 232 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 TMUB1Q9BVT8 246 aa21.24■□□□□ 0.99
PVT1-218ENST00000523328 NIPBLQ6KC79 2804 aaeCLIP21.24■□□□□ 0.99
PVT1-218ENST00000523328 TCRBV16S1A1N1A0A5B0 115 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 CEP104O60308 925 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 HAUS5O94927 633 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 MAOAP21397 527 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 NR0B1P51843 470 aaKnown RBP21.23■□□□□ 0.99
PVT1-218ENST00000523328 SARNPP82979 210 aaKnown RBP21.23■□□□□ 0.99
PVT1-218ENST00000523328 TIAL1Q01085 375 aaKnown RBP eCLIP21.23■□□□□ 0.996e-7■■■■□ 19.6
PVT1-218ENST00000523328 TRIP13Q15645 432 aaPredicted RBP21.23■□□□□ 0.99
PVT1-218ENST00000523328 APCDD1LQ8NCL9 501 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 OR52N2Q8NGI0 321 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 EEF1AKMT1Q8WVE0 214 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 ZNF559Q9BR84 538 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 AARSD1Q9BTE6 412 aaKnown RBP21.23■□□□□ 0.99
PVT1-218ENST00000523328 DEFB126Q9BYW3 111 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 PARVBQ9HBI1 364 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 KCNJ16Q9NPI9 418 aa21.23■□□□□ 0.99
PVT1-218ENST00000523328 ACANP16112 2415 aa21.22■□□□□ 0.99
PVT1-218ENST00000523328 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms