RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 TREML2Q5T2D2 321 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 PDZK1Q5T2W1 519 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 RGS7BPQ6MZT1 257 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 PKN3Q6P5Z2 889 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 SUSD1Q6UWL2 747 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 USP53Q70EK8 1073 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 EIF3MQ7L2H7 374 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 NECAB2Q7Z6G3 386 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 CLEC14AQ86T13 490 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 ATG4DQ86TL0 474 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 PIGZQ86VD9 579 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 HIPK1Q86Z02 1210 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 SKA3Q8IX90 412 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 C12orf45Q8N5I9 185 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 UXS1Q8NBZ7 420 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 C9orf43Q8TAL5 461 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 NANPQ8TBE9 248 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 GJA10Q969M2 543 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 TRIM43Q96BQ3 446 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 CCDC126Q96EE4 140 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 QRFPRQ96P65 431 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 CPNE1Q99829 537 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 KATNAL1Q9BW62 490 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 MRPL4Q9BYD3 311 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 SMOC2Q9H3U7 446 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 TMEM8AQ9HCN3 771 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 GPR27Q9NS67 375 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 TMLHEQ9NVH6 421 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 RBFOX1Q9NWB1 397 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 THUMPD1Q9NXG2 353 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 GDE1Q9NZC3 331 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 NDUFAF4Q9P032 175 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 SAMHD1Q9Y3Z3 626 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 PCDHGA9Q9Y5G4 932 aaKnown RBP8.33□□□□□ -1.08
SHPRH-208ENST00000520752 TRPV2Q9Y5S1 764 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 CAMTA1Q9Y6Y1 1673 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 SCN11AQ9UI33 1791 aa8.33□□□□□ -1.08
SHPRH-208ENST00000520752 GLYATL1P3A0A0U1RQE8 302 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 IQCMA0A1B0GVH7 501 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 A0A1W2PQ09 198 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PRAMEF22A3QJZ6 481 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 EFCAB7A8K855 629 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 UPK1AO00322 258 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 NEMP1O14524 444 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PPEF2O14830 753 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 BCKDKO14874 412 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SYN3O14994 580 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 INPP4BO15327 924 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 KCNQ2O43526 872 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 LGI1O95970 557 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 IFNA10P01566 189 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MT-ND2P03891 347 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 AMHP03971 560 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 GLAP06280 429 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 HEXBP07686 556 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ZNF806P0C7X5 589 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CKBP12277 381 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ANXA3P12429 323 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ITGB8P26012 769 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CASP2P42575 452 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SLC1A3P43003 542 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MASP1P48740 699 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TGM4P49221 684 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 EPHA5P54756 1037 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 DNAJB13P59910 316 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 DEFA6Q01524 100 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CHRNB3Q05901 458 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 LARS2Q15031 903 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PPA1Q15181 289 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TCEA2Q15560 299 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 GPR68Q15743 365 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SSX2Q16385 188 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TIGD6Q17RP2 521 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TMEM44Q2T9K0 475 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ZIK1Q3SY52 487 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PAN3Q58A45 887 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TRIM61Q5EBN2 209 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 DNLZQ5SXM8 178 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CAPN13Q6MZZ7 669 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 SCYL2Q6P3W7 929 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ERICH5Q6P6B1 374 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 FAM111BQ6SJ93 734 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 KDELC1Q6UW63 502 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 RASSF6Q6ZTQ3 369 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 DDX53Q86TM3 631 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ATPAF2Q8N5M1 289 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 PCSK9Q8NBP7 692 aaKnown RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 AGBL3Q8NEM8 1001 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 LPCAT1Q8NF37 534 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 OR52E4Q8NGH9 312 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 OR5K1Q8NHB7 308 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MYLIPQ8WY64 445 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 HAS1Q92839 578 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TMBIM1Q969X1 311 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 MFSD3Q96ES6 412 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 ERMAPQ96PL5 475 aaPredicted RBP8.32□□□□□ -1.08
SHPRH-208ENST00000520752 CSPG4P5Q96PW8 444 aa8.32□□□□□ -1.08
SHPRH-208ENST00000520752 TREX2Q9BQ50 279 aaPredicted RBP8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms