RNA–Protein interactions for RNA: ENST00000515479.5

RUFY3-215, Transcript of RUN and FYVE domain containing 3, human

TSL 2

Gene RUFY3, Length 893 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RUFY3-215	ENST00000515479	TAS2R14	Q9NYV8	317 aa		4.07	□□□□□ -1.76
RUFY3-215	ENST00000515479	LCMT1	Q9UIC8	334 aa		4.07	□□□□□ -1.76
RUFY3-215	ENST00000515479	SMAD5-AS1	Q9Y6J3	95 aa		4.07	□□□□□ -1.76
RUFY3-215	ENST00000515479	FLNB	O75369	2602 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SERINC4	A6NH21	518 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	ZNF233	A6NK53	670 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	MIF4GD	A9UHW6	222 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	EIF3H	O15372	352 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SLC16A4	O15374	487 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	PI15	O43692	258 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	ATP9A	O75110	1047 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	STAM2	O75886	525 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	HNRNPA1	P09651	372 aa	Known RBP eCLIP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GZMA	P12544	262 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	KRT13	P13646	458 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	ZNF23	P17027	643 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CTNNA2	P26232	953 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CCND2	P30279	289 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GTF2H1	P32780	548 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CTNNA1	P35221	906 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	MARCKSL1	P49006	195 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	DNA2	P51530	1060 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CLDN20	P56880	219 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	MRPS25	P82663	173 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	PRKCE	Q02156	737 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GCNT1	Q02742	428 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GUCY2D	Q02846	1103 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	RUNX1T1	Q06455	604 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CYP24A1	Q07973	514 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	BIRC2	Q13490	618 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	BAAT	Q14032	418 aa	Predicted RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	FGFBP1	Q14512	234 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	STXBP2	Q15833	593 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SNRNP35	Q16560	246 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	ALG11	Q2TAA5	492 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	MYLK3	Q32MK0	819 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	C18orf63	Q68DL7	685 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	KDM7A	Q6ZMT4	941 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	PLEKHM3	Q6ZWE6	761 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	DPPA4	Q7L190	304 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	NOTCH2NL	Q7Z3S9	236 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	DNAAF5	Q86Y56	855 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	NRROS	Q86YC3	692 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CBWD2	Q8IUF1	395 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CCDC60	Q8IWA6	550 aa	Predicted RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SYCP3	Q8IZU3	236 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	IQCK	Q8N0W5	287 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	HCAR2	Q8TDS4	363 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SLC44A1	Q8WWI5	657 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CTNNBL1	Q8WYA6	563 aa	Predicted RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	TAF4B	Q92750	862 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	KIFAP3	Q92845	792 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	SEMA4D	Q92854	862 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	APOPT1	Q96IL0	206 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CCDC43	Q96MW1	224 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GDAP1L1	Q96MZ0	367 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	AGPAT1	Q99943	283 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	KIFC3	Q9BVG8	833 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	KRTAP4-4	Q9BYR3	166 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	DDX47	Q9H0S4	455 aa	Known RBP	4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	THAP2	Q9H0W7	228 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	S1PR5	Q9H228	398 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	LRMDA	Q9H2I8	198 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	POMK	Q9H5K3	350 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	ZDHHC18	Q9NUE0	388 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	STK39	Q9UEW8	545 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	FAM153A	Q9UHL3	310 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	GTF3C4	Q9UKN8	822 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	TBX20	Q9UMR3	447 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	EXOC7	Q9UPT5	735 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	C2CD2	Q9Y426	696 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	STYXL1	Q9Y6J8	313 aa		4.06	□□□□□ -1.76
RUFY3-215	ENST00000515479	CHD5	Q8TDI0	1954 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	ANKRD36	A6QL64	1941 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	CNOT1	A5YKK6	2376 aa	Known RBP	4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	PTPRJ	Q12913	1337 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	IGKV6D-21	A0A0A0MT36	114 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	ANKRD63	C9JTQ0	380 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479		H0YHG0	523 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	HAS3	O00219	553 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	TTI1	O43156	1089 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	FAM189A1	O60320	539 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	DKC1	O60832	514 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	HSF2BP	O75031	334 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	RTN2	O75298	545 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	GGPS1	O95749	300 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	IGLV1-44	P01699	117 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	EDN1	P05305	212 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	RET	P07949	1114 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	PAEP	P09466	180 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	ERVK-10	P10266	1014 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	ABCD1	P33897	745 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	CA8	P35219	290 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	HSD17B3	P37058	310 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	HAL	P42357	657 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	MATR3	P43243	847 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	ARCN1	P48444	511 aa	Known RBP	4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	GCLM	P48507	274 aa		4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	NAP1L1	P55209	391 aa	Known RBP	4.05	□□□□□ -1.76
RUFY3-215	ENST00000515479	PEX3	P56589	373 aa		4.05	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms