RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 TYSND1Q2T9J0 566 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 KLHL38Q2WGJ6 581 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 THEMIS2Q5TEJ8 643 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 ZNF585AQ6P3V2 769 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 QSOX2Q6ZRP7 698 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 RGS9BPQ6ZS82 235 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 KIAA0408Q6ZU52 694 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 WDR53Q7Z5U6 358 aaPredicted RBP10.2□□□□□ -0.78
DDX41-216ENST00000513562 ASPGQ86U10 573 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 AFAP1L2Q8N4X5 818 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 TMEM156Q8N614 296 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 PPHLN1Q8NEY8 458 aaKnown RBP10.2□□□□□ -0.78
DDX41-216ENST00000513562 LPGAT1Q92604 370 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 FAM136AQ96C01 138 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 FAM129AQ9BZQ8 928 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 TIMMDC1Q9NPL8 285 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 ABCF3Q9NUQ8 709 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 B4GALT7Q9UBV7 327 aa10.2□□□□□ -0.78
DDX41-216ENST00000513562 INTS1Q8N201 2190 aaKnown RBP10.19□□□□□ -0.78
DDX41-216ENST00000513562 A0A1B0GVC2 190 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 FAM166BA8MTA8 275 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 GOLGA6L22H0YM25 854 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 H3BMM5 538 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SYT5O00445 386 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 WDR1O75083 606 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ITGA10O75578 1167 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 GLSO94925 669 aaPredicted RBP10.19□□□□□ -0.78
DDX41-216ENST00000513562 LY6G6DO95868 133 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ESR1P03372 595 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 TPM3P06753 285 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SLC35G6P0C7Q6 338 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 UQCRC1P31930 480 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 COILP38432 576 aaPredicted RBP10.19□□□□□ -0.78
DDX41-216ENST00000513562 CETN2P41208 172 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 MAGEA1P43355 309 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ADARP55265 1226 aaKnown RBP10.19□□□□□ -0.78
DDX41-216ENST00000513562 HERC3Q15034 1050 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 RPS6KA1Q15418 735 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 RIPPLY2Q5TAB7 128 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 CHSY3Q70JA7 882 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SLC22A16Q86VW1 577 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SLC26A11Q86WA9 606 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 REXO1L1PQ8IX06 675 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 CYP4X1Q8N118 509 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 APCDD1LQ8NCL9 501 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 PSD4Q8NDX1 1056 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 OR2M7Q8NG81 312 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SLC35B2Q8TB61 432 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ALG3Q92685 438 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 SLCO2A1Q92959 643 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 COX4I2Q96KJ9 171 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 TTTY12Q9BZ98 90 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ATG10Q9H0Y0 220 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ZNF395Q9H8N7 513 aaPredicted RBP10.19□□□□□ -0.78
DDX41-216ENST00000513562 PLEKHF2Q9H8W4 249 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 ETNK1Q9HBU6 452 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 NEUROD4Q9HD90 331 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 CHRAC1Q9NRG0 131 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 TREX1Q9NSU2 369 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 KCMF1Q9P0J7 381 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 GALPQ9UBC7 116 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 TFR2Q9UP52 801 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 LIPGQ9Y5X9 500 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 STAB1Q9NY15 2570 aa10.19□□□□□ -0.78
DDX41-216ENST00000513562 IGKV3D-11A0A0A0MRZ8 115 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 TRBV11-1A0A0K0K1C0 115 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 TCRBV16S1A1N1A0A5B0 115 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 GOLGA6L9A6NEM1 432 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 AQP7O14520 342 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 CHST10O43529 356 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 GALR3O60755 368 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 B4GALT2O60909 372 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 DNAJB6O75190 326 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 CHRM3P20309 590 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 PCSK6P29122 969 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 IMPA1P29218 277 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 FMO4P31512 558 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 SKIV2L2P42285 1042 aaKnown RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 DCAF7P61962 342 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 PLGLB1Q02325 96 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 KLF1Q13351 362 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 PCID2Q5JVF3 399 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 C1orf185Q5T7R7 199 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 RNF187Q5TA31 235 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 NDUFAF5Q5TEU4 345 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 SHEQ5VZ18 495 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 CAPN13Q6MZZ7 669 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 TRILQ7L0X0 811 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 GPALPP1Q8IXQ4 340 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 LRRN4CLQ8ND94 238 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 ZNF740Q8NDX6 193 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 SLC13A3Q8WWT9 602 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 ASB11Q8WXH4 323 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 PTCHD1Q96NR3 888 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 SH3GL2Q99962 352 aa10.18□□□□□ -0.78
DDX41-216ENST00000513562 CCDC177Q9NQR7 707 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 BEX4Q9NWD9 120 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 ZNF223Q9UK11 482 aaPredicted RBP10.18□□□□□ -0.78
DDX41-216ENST00000513562 AKAP6Q13023 2319 aa10.17□□□□□ -0.78
DDX41-216ENST00000513562 A0A0G2JMM0 328 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms