RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 KCNC2Q96PR1 638 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 IL4I1Q96RQ9 567 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 BTBD2Q9BX70 525 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 MRPL17Q9NRX2 175 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 IFNA5P01569 189 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 ZNF286BP0CG31 522 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 RAP2BP61225 183 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SF3A2Q15428 464 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.12□□□□□ -1.113e-6■■■■□ 19.6
HTT-208ENST00000510626 UBAP2Q5T6F2 1119 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 INTS5Q6P9B9 1019 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 UNC5DQ6UXZ4 953 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 MTPAPQ9NVV4 582 aaKnown RBP eCLIP8.12□□□□□ -1.11
HTT-208ENST00000510626 MGAT4CQ9UBM8 478 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 PRSS51A0A1B0GVH4 220 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CNTN2Q02246 1040 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CLVS2Q5SYC1 327 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 KIAA1161Q6NSJ0 714 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 BRAT1Q6PJG6 821 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FAM151BQ6UXP7 276 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 HIST2H3AQ71DI3 136 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 COMMD7Q86VX2 200 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 SLC35G5Q96KT7 338 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 KCNH6Q9H252 994 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 NME7Q9Y5B8 376 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 MON2Q7Z3U7 1717 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 C17orf113A0A1B0GUU1 675 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 GRIN3BO60391 1043 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 UBBP0CG47 229 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 UBCP0CG48 685 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 CERS1P27544 350 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 VEGFCP49767 419 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 RPS27AP62979 156 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 UBA52P62987 128 aaKnown RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 CCSAPQ6IQ19 270 aaPredicted RBP8.12□□□□□ -1.11
HTT-208ENST00000510626 ZNF676Q8N7Q3 588 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 OR2T33Q8NG76 320 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 OR1J4Q8NGS1 313 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 CD300LFQ8TDQ1 290 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 FUNDC2Q9BWH2 189 aa8.12□□□□□ -1.11
HTT-208ENST00000510626 A0A0G2JMP0 313 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 E7ESA3 106 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 IMPA2O14732 288 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 IDSP22304 550 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CDH8P55286 799 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 BLOC1S1P78537 153 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 MXD1Q05195 221 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 PCK2Q16822 640 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 APOBEC3HQ6NTF7 200 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 OR4M2Q8NGB6 313 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 FKBPLQ9UIM3 349 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 AGAP14A8MT82 685 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 LGR5O75473 907 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 RAB8AP61006 207 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 COX18Q8N8Q8 333 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 PYCR2Q96C36 320 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CDRT1O95170 752 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 APOC3P02656 99 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 MPP7Q5T2T1 576 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 AGAP7PQ5VUJ5 663 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 XKR5Q6UX68 686 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 TMEM174Q8WUU8 243 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 IQCMA0A1B0GVH7 501 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 POLR1CO15160 346 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 NCK1P16333 377 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CSNK2A2P19784 350 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 VSX2P58304 361 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 ZNF783Q6ZMS7 281 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CIR1Q86X95 450 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 IFNL1Q8IU54 200 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 PNPLA2Q96AD5 504 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 VRTNQ9H8Y1 702 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 TCRBV7S2A1N4TA0A589 114 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 TNFRSF10AO00220 468 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 IRF4Q15306 451 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 YIPF4Q9BSR8 244 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 TSSK6Q9BXA6 273 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 RIMKLBQ9ULI2 386 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 MAFBQ9Y5Q3 323 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 SLC33A1O00400 549 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 DLX3O60479 287 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 PPM1BO75688 479 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ECI1P42126 302 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 LEPRP48357 1165 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 WACQ9BTA9 647 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 B3GNT4Q9C0J1 378 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 EIF2B4Q9UI10 523 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 ERVK-19Q9WJR5 959 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 P2RX6O15547 441 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 EDNRAP25101 427 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CRY2Q49AN0 593 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SLC15A3Q8IY34 581 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 OR51D1Q8NGF3 324 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CNN2Q99439 309 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 SSX3Q99909 188 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CACNG6Q9BXT2 260 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ATG4BQ9Y4P1 393 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 J3QRK9 145 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 RBBP9O75884 186 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 HTR1AP08908 422 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms