RNA–Protein interactions for RNA: ENST00000507678.5

SPCS3-203, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 2,655 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-203ENST00000507678 DMRT3Q9NQL9 472 aa21.15■□□□□ 0.98
SPCS3-203ENST00000507678 KRT84Q9NSB2 600 aa21.15■□□□□ 0.98
SPCS3-203ENST00000507678 TBC1D3BA6NDS4 549 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 SUV39H1O43463 412 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 SEC14L2O76054 403 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 ITGB7P26010 798 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 GSTM2P28161 218 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 NFATC3Q12968 1075 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 TTC29Q8NA56 475 aaPredicted RBP21.14■□□□□ 0.98
SPCS3-203ENST00000507678 SLC5A11Q8WWX8 675 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 FAM83CQ9BQN1 747 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 SLC35A5Q9BS91 424 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 CCDC177Q9NQR7 707 aaPredicted RBP21.14■□□□□ 0.98
SPCS3-203ENST00000507678 LRRK1Q38SD2 2015 aa21.14■□□□□ 0.98
SPCS3-203ENST00000507678 SH3PXD2BA1X283 911 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 GRXCR1A8MXD5 290 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 PPIGQ13427 754 aaKnown RBP eCLIP21.14■□□□□ 0.972e-6■■□□□ 13.5
SPCS3-203ENST00000507678 ANKDD1AQ495B1 522 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 ANXA8L1Q5VT79 327 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 WFIKKN2Q8TEU8 576 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 STARD8Q92502 1023 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 CSF3RQ99062 836 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 DOK1Q99704 481 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 ERVK-18Q9QC07 812 aa21.14■□□□□ 0.97
SPCS3-203ENST00000507678 PCCBP05166 539 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 FPR1P21462 350 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 RRM2P31350 389 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 MAP2K4P45985 399 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 ELP6Q0PNE2 266 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 HIST2H2ACQ16777 129 aaPredicted RBP21.13■□□□□ 0.97
SPCS3-203ENST00000507678 RFX4Q33E94 735 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 HIST2H2AA3Q6FI13 130 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 LAIR1Q6GTX8 287 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 Q6ZPB1 254 aaPredicted RBP21.13■□□□□ 0.97
SPCS3-203ENST00000507678 REPS1Q96D71 796 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 FAM129BQ96TA1 746 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 TUBA1CQ9BQE3 449 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 REEP4Q9H6H4 257 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 SLC16A6O15403 523 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 EPHX1P07099 455 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 HOXA9P31269 272 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 PNLIPRP1P54315 467 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 ZNF33BQ06732 778 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 TMEM53Q6P2H8 277 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 GPR155Q7Z3F1 870 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 B3GNT8Q7Z7M8 397 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 ETFBKMTQ8IXQ9 262 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 PPCDCQ96CD2 204 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 GPATCH2Q9NW75 528 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 ADPRHL2Q9NX46 363 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 BTNL2Q9UIR0 455 aa21.13■□□□□ 0.97
SPCS3-203ENST00000507678 PNMA8BQ9ULN7 279 aaPredicted RBP21.13■□□□□ 0.97
SPCS3-203ENST00000507678 PSMD11O00231 422 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 RTCAO00442 366 aaKnown RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 HOXC11O43248 304 aaPredicted RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 DGCR6Q14129 220 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 ELAVL3Q14576 367 aaKnown RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 ZNF658BQ4V348 819 aaPredicted RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 PAGE2BQ5JRK9 111 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 KDM4DQ6B0I6 523 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 FUNDC2Q9BWH2 189 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 SNX8Q9Y5X2 465 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 EDDM13A0A1B0GTR0 161 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 SERPINB7O75635 380 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 CHI3L1P36222 383 aaPredicted RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 LSM3P62310 102 aaKnown RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 BCL7AQ4VC05 210 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 NXPE4Q6UWF7 544 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 C11orf65Q8NCR3 313 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 NFKBIDQ8NI38 313 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 CXorf40AQ8TE69 158 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 C16orf78Q8WTQ4 265 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 COQ8BQ96D53 544 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 EFCAB11Q9BUY7 163 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 SLC23A2Q9UGH3 650 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 HTR3EA5X5Y0 456 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 HTR1BP28222 390 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 PRIM2P49643 509 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 KCNJ10P78508 379 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 PRSS53Q2L4Q9 553 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 MPEG1Q2M385 716 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 GPR153Q6NV75 609 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 GET4Q7L5D6 327 aaPredicted RBP21.12■□□□□ 0.97
SPCS3-203ENST00000507678 LGR4Q9BXB1 951 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 ZDHHC5Q9C0B5 715 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 CDH7Q9ULB5 785 aa21.12■□□□□ 0.97
SPCS3-203ENST00000507678 PRR23AA6NEV1 266 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 UGT2B11O75310 529 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 GCM2O75603 506 aaPredicted RBP21.11■□□□□ 0.97
SPCS3-203ENST00000507678 IL3P08700 152 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 JUNBP17275 347 aaPredicted RBP21.11■□□□□ 0.97
SPCS3-203ENST00000507678 RXRGP48443 463 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 RELAQ04206 551 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 GTF2IRD2BQ6EKJ0 949 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 GTF2IRD2Q86UP8 949 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 RNF130Q86XS8 419 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 TBC1D15Q8TC07 691 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 TANKQ92844 425 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 SGPP1Q9BX95 441 aa21.11■□□□□ 0.97
SPCS3-203ENST00000507678 CHST8Q9H2A9 424 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms