RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 FER1L5A0AVI2 2057 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 URADA6NGE7 173 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 MAGEB17A8MXT2 336 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 C4orf51C9J302 202 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 MANBAO00462 879 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TERTO14746 1132 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 FFAR3O14843 346 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 GPR42O15529 346 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ITM2AO43736 263 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 NSA2O95478 260 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TGFB1P01137 390 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 PDYNP01213 254 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 KLK3P07288 261 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 CHN1P15882 459 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ALAS2P22557 587 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ATP1A2P50993 1020 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 PCBP4P57723 403 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ABCE1P61221 599 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 STXBP1P61764 594 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 DCDP81605 110 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF33BQ06732 778 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ABHD18Q0P651 414 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 COL9A2Q14055 689 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TOR1AIP1Q5JTV8 583 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TCHHL1Q5QJ38 904 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 DEPDC1Q5TB30 811 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TTC19Q6DKK2 380 aaPredicted RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 LCN10Q6JVE6 187 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 PDSS2Q86YH6 399 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 PPP1R14CQ8TAE6 165 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 RAB3IL1Q8TBN0 382 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 CCT6BQ92526 530 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 MTFMTQ96DP5 389 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 CMTM7Q96FZ5 175 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 F2RL3Q96RI0 385 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 KCNA7Q96RP8 456 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 REXO4Q9GZR2 422 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ELOVL6Q9H5J4 265 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 SLC22A11Q9NSA0 550 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 FARSBQ9NSD9 589 aaKnown RBP12.2□□□□□ -0.46
TCOF1-210ENST00000506767 PADI1Q9ULC6 663 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 ZMIZ1Q9ULJ6 1067 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 TIMM22Q9Y584 194 aa12.2□□□□□ -0.46
TCOF1-210ENST00000506767 AKAP13Q12802 2813 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 A0A0A6YYC8 382 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 H0YIG0 161 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 I3L1I5 382 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KLF11O14901 512 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 GALR3O60755 368 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SNNO75324 88 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ULK1O75385 1050 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SNUPNO95149 360 aaKnown RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ETHE1O95571 254 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KRT6AP02538 564 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KRT6BP04259 564 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CCNYL3P0C7X3 344 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF888P0CJ79 500 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 UROSP10746 265 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ALOX12P18054 663 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 NR1D1P20393 614 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 AGXTP21549 392 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 PTX3P26022 381 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 HMOX2P30519 316 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 STAT5AP42229 794 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SLC1A6P48664 564 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KRT6CP48668 564 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ARFIP1P53367 373 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 RPS13P62277 151 aaKnown RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 PHEXP78562 749 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 BST1Q10588 318 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 IFT88Q13099 833 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 STX3Q13277 289 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CLN3Q13286 438 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CUL3Q13618 768 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 DDX39BQ13838 428 aaKnown RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 HERC3Q15034 1050 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 TGIF1Q15583 401 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 UGT3A2Q3SY77 523 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 NKAIN1Q4KMZ8 207 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 TMEM35AQ53FP2 167 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 HSP90B2PQ58FF3 399 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 C1orf189Q5VU69 101 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KHDRBS2Q5VWX1 349 aaKnown RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 KANK2Q63ZY3 851 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ABHD17CQ6PCB6 329 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 FAM199XQ6PEV8 388 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 RNF165Q6ZSG1 346 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CHSY3Q70JA7 882 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ABHD13Q7L211 337 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 PRSS41Q7RTY9 318 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 UBE3DQ7Z6J8 389 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 TRIM42Q8IWZ5 723 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 HOMEZQ8IX15 550 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CACNA2D3Q8IZS8 1091 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF248Q8NDW4 579 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 OR2L5Q8NG80 312 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 OR9A4Q8NGU2 314 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ZCCHC10Q8TBK6 192 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SELENOMQ8WWX9 145 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms