RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 TBC1D20Q96BZ9 403 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 TSPAN17Q96FV3 270 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 TSNARE1Q96NA8 513 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 LPAR4Q99677 370 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 WDR83Q9BRX9 315 aaKnown RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 RNF32Q9H0A6 362 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 RHOJQ9H4E5 214 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 PELI2Q9HAT8 420 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 KCNK13Q9HB14 408 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 POPDC3Q9HBV1 291 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 SAYSD1Q9NPB0 183 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 OLAHQ9NV23 265 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 ABI3Q9P2A4 366 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 IKZF3Q9UKT9 509 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 OSGIN2Q9Y236 505 aa11.27□□□□□ -0.61
MED28-203ENST00000503945 UTP11Q9Y3A2 253 aaKnown RBP11.27□□□□□ -0.61
MED28-203ENST00000503945 TEP1Q99973 2627 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 MAGEB17A8MXT2 336 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 LRRTM2O43300 516 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 PRMT3O60678 531 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 B4GALT2O60909 372 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 CDC123O75794 336 aaPredicted RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 RASAL1O95294 804 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 CRYABP02511 175 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 FHP07954 510 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 SERPINA6P08185 405 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 C1GALT1C1LP0DN25 315 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 SSTR1P30872 391 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 HNF4AP41235 474 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 OR4D2P58180 307 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 CAV1Q03135 178 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 USP10Q14694 798 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 FASTKD3Q14CZ7 662 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 MEP1AQ16819 746 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 SFT2D3Q587I9 215 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 ACER2Q5QJU3 275 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 H3F3CQ6NXT2 135 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 CAPN12Q6ZSI9 719 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 LANCL3Q6ZV70 420 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 ADAMTSL2Q86TH1 951 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 CEP97Q8IW35 865 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 OR5T3Q8NGG3 340 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 DNAJB8Q8NHS0 232 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 UTP15Q8TED0 518 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 ANKRD49Q8WVL7 239 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 FAR2Q96K12 515 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 PTCHD1Q96NR3 888 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 DPH5Q9H2P9 285 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 MMP25Q9NPA2 562 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 MTO1Q9Y2Z2 717 aaKnown RBP11.26□□□□□ -0.61
MED28-203ENST00000503945 OARD1Q9Y530 152 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 MYO7BQ6PIF6 2116 aa11.26□□□□□ -0.61
MED28-203ENST00000503945 A0A1B0GUH1 482 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 OR5H15A6NDH6 313 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 NPEPPSL1A6NEC2 478 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 ZNF860A6NHJ4 632 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 PSMD12O00232 456 aaPredicted RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 DNAJB6O75190 326 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 PIAS1O75925 651 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 WDR47O94967 919 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 GSTA2P09210 222 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 ZNF888P0CJ79 500 aaPredicted RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 CCDC166P0CW27 439 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 STMN1P16949 149 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 TNFRSF8P28908 595 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 GDF5P43026 501 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 EFNA3P52797 238 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 PLTPP55058 493 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 PER3P56645 1201 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 TAS2R50P59544 299 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 RAB8AP61006 207 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 STXBP1P61764 594 aaKnown RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 RHAGQ02094 409 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 ZNF460Q14592 562 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 TSNQ15631 228 aaKnown RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 INAQ16352 499 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 PPP1R3AQ16821 1122 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 SP5Q6BEB4 398 aaPredicted RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 GPSM1Q86YR5 675 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 SHISA5Q8N114 240 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 CYP4X1Q8N118 509 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 KRT78Q8N1N4 520 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 TCAIMQ8N3R3 496 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 ARMC2Q8NEN0 867 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 TTLQ8NG68 377 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 RHBDF1Q96CC6 855 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 CPNE1Q99829 537 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 UTP23Q9BRU9 249 aaKnown RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 DERL2Q9GZP9 239 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 CNOT10Q9H9A5 744 aaKnown RBP11.25□□□□□ -0.61
MED28-203ENST00000503945 LANCL2Q9NS86 450 aa11.25□□□□□ -0.61
MED28-203ENST00000503945 NCF1BA6NI72 391 aaPredicted RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 NCF1CA8MVU1 366 aaPredicted RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 CLGNO14967 610 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 RAD51CO43502 376 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 PRAMEF2O60811 474 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 SMIM10L1P0DMW3 83 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 PRF1P14222 555 aa11.24□□□□□ -0.61
MED28-203ENST00000503945 NCF1P14598 390 aaPredicted RBP11.24□□□□□ -0.61
MED28-203ENST00000503945 HPDP32754 393 aaPredicted RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms