RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 PWWP2BQ6NUJ5 590 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 MMD2Q8IY49 270 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 LSMEM2Q8N112 164 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 NIPA2Q8N8Q9 360 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 GPRC5AQ8NFJ5 357 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 OR13C3Q8NGS6 347 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 U2AF1L4Q8WU68 220 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 MUS81Q96NY9 551 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 CRNKL1Q9BZJ0 848 aaKnown RBP5.07□□□□□ -1.6
NIPBL-203ENST00000503274 P2RY12Q9H244 342 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 RABEP2Q9H5N1 569 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 ATP13A3Q9H7F0 1226 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 DDX19BQ9UMR2 479 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 TNNQ9UQP3 1299 aa5.07□□□□□ -1.6
NIPBL-203ENST00000503274 URADA6NGE7 173 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 MSGN1A6NI15 193 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 CLDN4O14493 209 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 DIAPH2O60879 1101 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 KHDRBS3O75525 346 aaKnown RBP5.06□□□□□ -1.6
NIPBL-203ENST00000503274 GGPS1O95749 300 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 OR52Z1P0C646 297 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 SAGP10523 405 aaPredicted RBP5.06□□□□□ -1.6
NIPBL-203ENST00000503274 IRF2P14316 349 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 CYP11B2P19099 503 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 CD22P20273 847 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ACHEP22303 614 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 CSTF2P33240 577 aaKnown RBP eCLIP5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ALDH3A2P51648 485 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 KLC1Q07866 573 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ACSM1Q08AH1 577 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 SLC25A53Q5H9E4 307 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 SLC35D3Q5M8T2 416 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ZC2HC1BQ5TFG8 222 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ZSCAN25Q6NSZ9 544 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 LGI2Q8N0V4 545 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 BMPERQ8N8U9 685 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 OR6J1Q8NGC5 347 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 ROBO4Q8WZ75 1007 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 RMDN1Q96DB5 314 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 MAGED4Q96JG8 741 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 LRRC3BQ96PB8 259 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 DEFB118Q96PH6 123 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 SHARPINQ9H0F6 387 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 CDH20Q9HBT6 801 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 TMEM181Q9P2C4 612 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 WDR83OSQ9Y284 106 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 EXOC6BQ9Y2D4 811 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 DOCK1Q14185 1865 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 KIF26BQ2KJY2 2108 aa5.06□□□□□ -1.6
NIPBL-203ENST00000503274 LAMA2P24043 3122 aaKnown RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 A8MXE2 369 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 MPHOSPH10O00566 681 aaKnown RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 ARPC2O15144 300 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 TBX10O75333 385 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 DDHD2O94830 711 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 ACSL3O95573 720 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 FYNP06241 537 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 DYNLL1P63167 89 aaKnown RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 GCNT1Q02742 428 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 HNRNPDQ14103 355 aaKnown RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 PHKG1Q16816 387 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 XKR6Q5GH73 641 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 LCE1EQ5T753 118 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 TATDN1Q6P1N9 297 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 Q6ZSR9 355 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 MFN1Q8IWA4 741 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 NDUFAF2Q8N183 169 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 DBF4BQ8NFT6 615 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 OR4K1Q8NGD4 311 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 OR5AP2Q8NGF4 316 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 SERINC2Q96SA4 455 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 FUCA2Q9BTY2 467 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 IL1RAPL2Q9NP60 686 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 PPANQ9NQ55 473 aaKnown RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 PLCXD1Q9NUJ7 323 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 HOXC10Q9NYD6 342 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 TBC1D7Q9P0N9 293 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 C5AR2Q9P296 337 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.05□□□□□ -1.6
NIPBL-203ENST00000503274 RASAL2Q9UJF2 1139 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 SMCHD1A6NHR9 2005 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 DOCK3Q8IZD9 2030 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 SZT2Q5T011 3432 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 MGAMO43451 1857 aa5.05□□□□□ -1.6
NIPBL-203ENST00000503274 PTPRFP10586 1907 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 NTN3O00634 580 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-203ENST00000503274 GLRA3O75311 464 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CSN3P07498 182 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 CYP2B6P20813 491 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 VEGFCP49767 419 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 FCN2Q15485 313 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 KRTAP27-1Q3LI81 207 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 LCN1P1Q5VSP4 162 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 MFSD14CQ5VZR4 134 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 TMEM179Q6ZVK1 233 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 RAB42Q8N4Z0 105 aa5.04□□□□□ -1.6
NIPBL-203ENST00000503274 SNRNP27Q8WVK2 155 aaKnown RBP5.04□□□□□ -1.6
NIPBL-203ENST00000503274 OTUB1Q96FW1 271 aaPredicted RBP5.04□□□□□ -1.6
NIPBL-203ENST00000503274 FAM71F1Q96KD3 344 aaPredicted RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms